| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3819 |
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| Symbol | nusA |
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| ID | 5200932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4191232 |
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| End bp | 4192821 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583374 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001264302 |
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| Protein GI | 148556720 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0301891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG CCATTTCCGC CAACCGCGCC GAGCTGCTCG CGATCGCCGA CGCCGTCGCG
CGCGAAAAGC TGATCGATCG CGAGATCGTG ATCGAGGCGA TGGAGGACGC GATCCAGCGC
GCCGCCCGCG CCCGCTACGG CGCCGAGAAC GACATCCGCG CGAAGATCGA CGGCAAGACC
GGCGACATGC GGCTGTGGCG CGTCGTCGAG GTGGTCGAGC AGGTCGACGA CTATTTCAAG
CAGGTCTCGG TCGCCGACGC GCAGAAGCTG CAGAAGGACG CCGCGATCGG CGACTTCATC
GTCGATCCGC TGCCCCCGAT CGAGTTCGGC CGCATCGCCG CCCAGGCCGC CAAGCAGGTG
ATCTTCCAGA AGGTCCGCGA CGCCGAGCGC GAGCGCCAGT ATGAAGAGTT CAAGGATCGC
GCCAACGAGA TCATCACCGG CGTCGTCAAG CGGGTCGAGT TCGGCCATGT CGTCGTCGAC
CTGGGCCGCG CCGAGGGCGT CATCCGCCGC GACCAGCAGA TCCCGCGCGA GGTGGTCCGC
GTCGGCGATC GCGTCCGCAG CCTGATCCTG AGCGTCCGCC GCGAGAATCG CGGGCCGCAG
ATCTTCCTGA GCCGCGCGCA TCCCGAGTTC ATGAAGAAGC TGTTCGCGCA GGAAGTGCCC
GAGATCTACG ACGGCATCAT CGAGATCAAG GCCGCCGCCC GCGACCCGGG CAGCCGCGCC
AAGATCGGCG TGATCAGCCA TGACGGCTCG ATCGATCCGG TCGGCGCCTG CGTCGGCATG
AAGGGCAGCC GCGTCCAGGC GGTCGTCCAG GAGATGCAGG GCGAGAAGAT CGACATCATC
CCCTGGTCGC CCGACACCGC GACCTTCGTC GTCAACGCGC TGCAGCCCGC CCAGGTCTCG
CGCGTCGTCA TCGACGAGGA GGAGGAGCGC ATCGAGGTGG TCGTCCCCGA CGATCAGCTC
AGCCTCGCCA TCGGCCGCCG CGGCCAGAAC GTCCGCCTCG CCAGCCAGCT CACCGGCAAG
GCGATCGACA TCCTGACCGA GGCCGACGCC AGCGAGAAGC GCCAGAAGGA ATTCCTCCAG
AACAGCGAGA TGTTCCAGAA CGAGCTCGAC GTCGACGAGA CGCTGGCCCA GCTGCTCGTC
GCCGAGGGCT TCGGCGCGCT CGAGGAGGTC GCCTATGTCG AGCTCGACGA GCTCGCCTCG
ATCGAGGGCT TCGACGAGGA GCTTGGCGCC GAGCTGCAGA GCCGCGCGCA GGAAGCGCTG
GAGCGCCGCG AAGCCGCCGC CCGCGAGGAG CGCCGCTCGC TGGGCGTCGA GGACGCGCTG
GCCGAGCTGC CCTATCTGAC CGAGGCGATG CTGGTCACGC TCGGCAAGGC CGGGATCAAG
ACGCTCGACG ACCTGGCCGA CCTGGCGACC GACGAGCTGA TCCAGAAGAA GCGGCCCGAG
CAGCGCCGCC GCCAGAACAG CGACCGCCCC GAGCGCGGCG ACCGCGAGGA GAACAAGGGC
GGCGTCCTGG CCGAATATGG GCTGAGCGAG GAGCAGGGCA ACGAGATCAT CATGGCCGCC
CGCGCCCACT GGTTCACCGA CGAGGCCTGA
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| Protein sequence | MATAISANRA ELLAIADAVA REKLIDREIV IEAMEDAIQR AARARYGAEN DIRAKIDGKT
GDMRLWRVVE VVEQVDDYFK QVSVADAQKL QKDAAIGDFI VDPLPPIEFG RIAAQAAKQV
IFQKVRDAER ERQYEEFKDR ANEIITGVVK RVEFGHVVVD LGRAEGVIRR DQQIPREVVR
VGDRVRSLIL SVRRENRGPQ IFLSRAHPEF MKKLFAQEVP EIYDGIIEIK AAARDPGSRA
KIGVISHDGS IDPVGACVGM KGSRVQAVVQ EMQGEKIDII PWSPDTATFV VNALQPAQVS
RVVIDEEEER IEVVVPDDQL SLAIGRRGQN VRLASQLTGK AIDILTEADA SEKRQKEFLQ
NSEMFQNELD VDETLAQLLV AEGFGALEEV AYVELDELAS IEGFDEELGA ELQSRAQEAL
ERREAAAREE RRSLGVEDAL AELPYLTEAM LVTLGKAGIK TLDDLADLAT DELIQKKRPE
QRRRQNSDRP ERGDREENKG GVLAEYGLSE EQGNEIIMAA RAHWFTDEA
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