Gene Swit_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3806 
Symbol 
ID5197586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4179290 
End bp4179625 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content69% 
IMG OID640583361 
Productanti-sigma-factor antagonist 
Protein accessionYP_001264289 
Protein GI148556707 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0167156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATGGG CGGGGTCGTC ATCGGCGCGG GGACCGGTTG GGCGGCCGGC AGGCGTCATC 
GATGACGGCG CGCGCGATGC CTTTCTCGAT CATCTGCGCT CGGGCGTGGC GGATGCCGCC
GCGTCGGGCG GCGACTTCCT CCTCGACCTC GCGGCGGTCG ACCATATGTC GGCGGGCGCG
CTGATGGCGT TGACGATCGC GCGCAAGGAA GCGATCACCA GCGACGTGAC GATCGTGCTC
GCCCGGCCCA GCCCGGCGCT GCGCGAAGTG CTGGAGATCA GCCGCTACCA GCTGATCTTC
GACATCGTCG ACGACCTCGA CGGCGGAAGG GACTGA
 
Protein sequence
MQWAGSSSAR GPVGRPAGVI DDGARDAFLD HLRSGVADAA ASGGDFLLDL AAVDHMSAGA 
LMALTIARKE AITSDVTIVL ARPSPALREV LEISRYQLIF DIVDDLDGGR D