| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3801 |
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| Symbol | |
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| ID | 5199650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4174066 |
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| End bp | 4175649 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583356 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001264284 |
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| Protein GI | 148556702 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.421315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0495277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC CGAACCGCCC CGACCGCCGC ACCTTCGCGA TCATCTCGCA TCCCGACGCC
GGCAAGACCA CGCTGACCGA GAAGCTGCTC TATTTCGGCG GCGCGATCCA TCTGGCCGGC
GAGGTCAAGG CGCGCGGCCA GACGCGGCGG GCGCGGTCCG ACTGGATGAA GATCGAGCAG
CAGCGCGGCA TTTCCGTCAC CTCCTCGGTG ATGACCTTCG AGCGCGACGG CATCACCTTC
AACCTGCTCG ACACGCCGGG CCACGAGGAT TTCTCGGAGG ATACCTATCG CACCCTGACC
GCCGTCGACT CGGCGGTGAT GGTGATCGAC GCGGCCAAGG GCATCGAGCC GCAGACCCGC
AAGCTGTTCG AGGTGTGCCG GCTCCGCTCG GTGCCGATCA TCACCTTCGT CAACAAGGTC
GACCGCGAGG GCCGCCCGGC GTTCGAGCTG CTCGACGAGA TCGCCGACGC GCTGGCGCTC
GACGTCGCGC CGATGAGCTG GCCGGTCGGC ATGGGCGGCA CCTTCGAAGG GATATACGAC
CTCGCCCGCG ACCGGCTCTA CCGCCCGGCG TCGGACGCGA CCGGCGCCTA TGAGGGCGAT
TCGGTCGCGG TCGCCGGCCT CGGCGATTCG CAGCTCGACG GCATGGTCTC GGCCGAGGGC
GTGGCGCTGC TGCGCGAGGA GGCAGAGCTG GCGCAGGTCG GCTATGCGCC GTTCGACGAG
GCCGCCTATC TCCATGGCGA CCTCACCCCG GTCTATTTCG GATCGGCGCT CAAGGATTTC
GGCGTCGAGC AGCTCATCGA CGCGCTGGCC GACTTCGCGC CGAGCCCGCG TCCGCAGCCC
GGCGAGCCGC GCGACGTCGA TCCCGGCGAG CCCAACGTCG CCGGCTTCGT CTTCAAGGTG
CAGGCGAACA TGAACCCGCA GCACCGCGAC CGCGTCGCCT TCATGCGGCT CTGCTCGGGC
CGGTTCCGGC GCGGCATGAA GCTCGCCCAG GTCGGCACCG GCAAGCAGAT CGCGATCCAC
AGCCCGATCC TGTTCTTCGC GCAGAATCGC GAGCTGGCCG AGGAAGCCTT TCCCGGCGAC
ATCATCGGCA TCCCCAACCA TGGCACCCTG CGCGTCGGCG ACACGCTGAC CGAGGGCGAG
ATGATCCGCT TCACCGGCCT GCCCAATTTC GCGCCCGAGA TCCTGCGCCG CGTGAAGCTC
GCCGATCCGA CCAAGACCAA GCAGCTCCGC AACGCGCTCA ACGACATGGC GGAGGAGGGG
ATCATGCAGG TCTTCCACCC GCAGATCGGG TCGCAGCTCG TGATCGGCGT GGTCGGCCAG
CTCCAGCTCG ACGTGCTGAT CTCGCGCCTC CAGGCCGAGT ACAAGGTCGA GGCGGGCTTC
GAACCCTCGC CCTACGATAC CGCGCGCTGG ATCACGGCGG ACGACGAGAA GGCGCTCGAC
GAGTTCATGG GCCTGCACCG CTCGGCGATG GCGCACGACC GCGACGAGGC GCCGGTGTTC
ATGGCCAAGG ACGCCTGGGA GCTGAACTAT ATCCAGGGCA AGTTCCCCGG GCTGCGCTTC
TCGGCGACCA AGGACCGCCG CTGA
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| Protein sequence | MSKPNRPDRR TFAIISHPDA GKTTLTEKLL YFGGAIHLAG EVKARGQTRR ARSDWMKIEQ
QRGISVTSSV MTFERDGITF NLLDTPGHED FSEDTYRTLT AVDSAVMVID AAKGIEPQTR
KLFEVCRLRS VPIITFVNKV DREGRPAFEL LDEIADALAL DVAPMSWPVG MGGTFEGIYD
LARDRLYRPA SDATGAYEGD SVAVAGLGDS QLDGMVSAEG VALLREEAEL AQVGYAPFDE
AAYLHGDLTP VYFGSALKDF GVEQLIDALA DFAPSPRPQP GEPRDVDPGE PNVAGFVFKV
QANMNPQHRD RVAFMRLCSG RFRRGMKLAQ VGTGKQIAIH SPILFFAQNR ELAEEAFPGD
IIGIPNHGTL RVGDTLTEGE MIRFTGLPNF APEILRRVKL ADPTKTKQLR NALNDMAEEG
IMQVFHPQIG SQLVIGVVGQ LQLDVLISRL QAEYKVEAGF EPSPYDTARW ITADDEKALD
EFMGLHRSAM AHDRDEAPVF MAKDAWELNY IQGKFPGLRF SATKDRR
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