Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3800 |
Symbol | |
ID | 5199147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4172671 |
End bp | 4173846 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640583355 |
Product | hypothetical protein |
Protein accession | YP_001264283 |
Protein GI | 148556701 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.225042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0906126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCACG ACGTCATCAT CATCGGCGCC GGCGCGGCCG GGTTGATGTG CGCGCTGACG GCGGGACAGC GCGGGCGGCG GGTGCTGCTG CTCGATCATC TCGACCGGAC GGGGGCGAAG ATCCTGATCT CGGGCGGCGG GCGCTGCAAC TTCACCAACG CCAATGGCGG GCTGGCCGAG CGCTACCTCT CCGCCAATCC GCATTTCGCC CGATCGGCGC TCGGCCGCTA CCGGCCCGCC GATGTCATCG ACCTGGTCGA CCGCCACGGC ATCGCCTGGC ACGAGAAGAC GCTCGGCCAG CTCTTCTGCG ACGGATCGGC GCGGCAGGTC GTCGCGATGC TGGAGGAGGA GTGCGCGGCG GGCGGGGTCG AGACCAGGCT GCTCGCCCGC ATCGCCGCCA TCTCGAAACC CGACGAGCGC TTCCGGGTCG AGACGCCGGG CGGCACCCAC GCCGCGCCGT CGCTGGTGAT CGCGACCGGC GGCCCGTCGA TCCCGAAGAT GGGCGCGACC GGCTTCGCCT ATGACGTCGC GCGCCAGTTC GGGCTGAAGG TGGTCGAGCC GCGCCCGGCG CTGGTGCCGC TGACGCTGGG CCAGGACGAC CGATTGTTCG AGACGCTGTC GGGCGTCTCG CTCGACGTCG TCGCCAGCCT CGGCAAGGCC CGCTTCCGCG AGGCGGCGCT GTTCACCCAT CGCGGCCTGT CGGGCCCGGC GATCCTCCAG ATCAGCAGCT ATTGGCGGCA TGGCGACACG CTGTCGCTCG ACCTGCTGCC CGGCGCCGAC GCGGCCGCCC TGCTGATCGC GGCGAAGCAG GCGCGCCCGA AGGCCGAGCC GCGCACGATT TTGCGCGAGC ATTTCCCCGA CCGGCTCGCC GACGTGCTGG CCGATCGGCT GGGGCTGTCA GGGCCGATGC TGGGTCACAA GGACCAGGCG CTGGCGACCG CCGGGCGCAG GCTCAACGGC TGGCCGTTCA CGCCGAACGG ATCGGAGGGC TTCGCCAAGG CCGAGGTGAC GATCGGCGGC GTCTCGACCG ACGGACTCGA CCAGCGCACC CTGATGGCGA AGAAGGCGCC GGGCCTGCAT TTCATCGGCG AGGCGGTCGA CGTGACCGGC TGGCTCGGCG GCTATAATTT TCAGTGGGCC TGGGCGAGCG GCCGGGCGGC GGGCGAGGTC GCCTGA
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Protein sequence | MSHDVIIIGA GAAGLMCALT AGQRGRRVLL LDHLDRTGAK ILISGGGRCN FTNANGGLAE RYLSANPHFA RSALGRYRPA DVIDLVDRHG IAWHEKTLGQ LFCDGSARQV VAMLEEECAA GGVETRLLAR IAAISKPDER FRVETPGGTH AAPSLVIATG GPSIPKMGAT GFAYDVARQF GLKVVEPRPA LVPLTLGQDD RLFETLSGVS LDVVASLGKA RFREAALFTH RGLSGPAILQ ISSYWRHGDT LSLDLLPGAD AAALLIAAKQ ARPKAEPRTI LREHFPDRLA DVLADRLGLS GPMLGHKDQA LATAGRRLNG WPFTPNGSEG FAKAEVTIGG VSTDGLDQRT LMAKKAPGLH FIGEAVDVTG WLGGYNFQWA WASGRAAGEV A
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