Gene Swit_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3799 
Symbol 
ID5199146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4171565 
End bp4172716 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content71% 
IMG OID640583354 
Producthypothetical protein 
Protein accessionYP_001264282 
Protein GI148556700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.937718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0900877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCTC CAGACGCGCC CGCGCGGCGG ATGGCGCGAC CACCATTTCC CCCCGTATCG 
CAGGCGATCG GCCTTGCGCG GCTGCTCTGC ATCCTCGGCA TCGTCTATGT CCATGCCTGG
ACCGGGCTCG GCGGTGACCA GATGGCGGCG CAGATGGGGT CGGCGCAGGA TATCCTGCGC
TGGACGGTGG TCGAGCTGTT CGGACGCAGC GCGGTGCCGC TGCTCAGCAT GGTGTCGGGC
TGGCTGGTCG CCGGGTCGCT CGCGCGGCGC GGGGCGAAGC CCTTCCTCGA CAGCAAGGCG
CGCACCATCC TGCTGCCGAT GATCCTGTGG AACGCGATCG CGATGGTGCT GGTGGTCGGC
GCCGCCACGC TCGGCTGGGC GCGGGCGCCG CTGCTCGGCG ACGCGCGCTG GATCGCCGAC
AATCTCCTCA ACCTCACCCG TGCCGGCGAC ATCAACGTCC AGACCGCCTT CCTGCGCGAC
CTGTTCCTCT GCATGCTCGC CGCGCCGCTG CTGGTGCGGC TGCGCAGCCG CTGGCTGCTG
CTGGTCGGCG CGCTGGCCGC GCTGTGGTGG GTGAGCCTGT TCAAATTCCC GCTGCTGCTG
CGCCCGACGA TCCTGCTCTT CTTCGTCGGC GGCATCCTCG CCCGGCGTCA CGGCCTGGCC
GAGCGCGCGG CGCTGCTGCC GCCCTGGCAG GCGGTGCTGC CCTTCCTGCT GGTCGTGCCG
GTCAAGATAT GGCTGTCGAT CGAGAATGGC GGGCTCGCCG ATTTCCATCT CCACGCGACC
GCGGCGGTCG ACCTGCTGAC GCGCAGCGCG GCCTCGCTGC TGGTCTGGCG CGGGGCGATC
GCGCTGGCCG CGCGCCCGGT CGGTGTCCGG CTGCTCGAGT TCGAGCGCTA CGCCTTCTTC
CTGTTCTGCT GCCACCTGCT GTTCATGTGG CTGGTCGCGC CCGCGATCGG GGAACTGACG
GGGACGATGG GAAGTCCGCT ATGGCCGGCC TTCTTCCTGC TCCAGCCGGC GCTGGCCTTC
GGCTTCGCGA TCCTCCTGGC CAAGGCGGTC GAGGCGGTCT CCCCGAAGCT CGCCGAATTG
TTGAGCGGCG GCCGGCTGGG CCGTGATCAG GCGACCTCGC CCGCCGCCCG GCCGCTCGCC
CAGGCCCACT GA
 
Protein sequence
MLPPDAPARR MARPPFPPVS QAIGLARLLC ILGIVYVHAW TGLGGDQMAA QMGSAQDILR 
WTVVELFGRS AVPLLSMVSG WLVAGSLARR GAKPFLDSKA RTILLPMILW NAIAMVLVVG
AATLGWARAP LLGDARWIAD NLLNLTRAGD INVQTAFLRD LFLCMLAAPL LVRLRSRWLL
LVGALAALWW VSLFKFPLLL RPTILLFFVG GILARRHGLA ERAALLPPWQ AVLPFLLVVP
VKIWLSIENG GLADFHLHAT AAVDLLTRSA ASLLVWRGAI ALAARPVGVR LLEFERYAFF
LFCCHLLFMW LVAPAIGELT GTMGSPLWPA FFLLQPALAF GFAILLAKAV EAVSPKLAEL
LSGGRLGRDQ ATSPAARPLA QAH