| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3798 |
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| Symbol | |
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| ID | 5199145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4169451 |
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| End bp | 4171232 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583353 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001264281 |
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| Protein GI | 148556699 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.172046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTTT CCTCCCTGCC CCGGCCCGTC GCCGAGGCTA TCACCGAGCG CGGCTACACC
GCCCCTACTC CCGTCCAGGC GCAGGTGATC GCCGCCGAGG CGCACGACCG CGACCTGCTC
GTCTCCGCCC AGACCGGGTC GGGCAAGACC GTCGCCTACG GCCTCGCCAT CGCCGAGACG
CTGCTGCAGG GCGCCGAGGC CCTGCCCCGC GCCGGCGAGC CGCTCGCCCT GATCATCGCC
CCGACCCGCG AGCTCGCGCT CCAGGTGCAG CGCGAGCTGC AATGGCTCTA CGCCAAGCTC
GGCGCGCGGG TGGTGAGCTG CGTCGGCGGC ATGAACGTGC GCGTCGAGCA GCGGCAGCTC
AGCTATGGCT GCCACATCGT CGTCGGCACG CCGGGCCGGC TCAAGGACCA TCTCGAACGC
GGCGCGCTCC AGCCCGGATC GCTGCGCGCG GTGATCCTCG ACGAGGCCGA CGAGATGCTC
GACCTGGGCT TCCGCGAGGA TCTGGAGGAG ATCCTCGACC TGACCCCGCC CGAGCGCCGC
ACGCTGCTCT TCTCGGCGAC GATGCCCAAG CCGATCGCCC TGCTCGCCAA GCGCTACCAG
CGCGACGCGC TGCGCATCCA GACGACCAGC GAGCGCGAAT CCCATGCCGA TATCGACTAT
CGCGCGATGG CCGTCGCCCC GGCCGACATC CAGAACGCCG TCGTCAACGT CCTGCGCTTC
CACGAAGCCA AGGGCGCGAT GGTGTTCTGC GCCACGCGCG AGAATGTCCG TCGCCTGTCG
GCGACGCTGA CCGAGCGCGG CTTCTCGGCC GTCACCCTGT CGGGCGAGCT CAGCCAGAAC
GAGCGCAACC ACGCGCTCCA GGCGTTGCGC GACCGCCGCG CGCGGGTCTG CGTCGCGACC
GACGTCGCGG CGCGCGGCAT CGACCTTCCG GGACTCGAGC TGGTGATCCA TGCCGAGCTG
CCGATCGATC CCGAGACGCT CCAGCACCGC TCGGGCCGCA CCGGCCGCGC GGGCCGGAAG
GGCACCTGCG TCCTCATCAC CCCCTATCAG CGCCGCCGCC ATGCCGAGCG GCTGCTGCGC
GGCGCCAACG TCAACGCCAC CTGGGACAAG GTGCCGACGC CCGACGAGAT TTATGCGCGG
GACCAGGAAA GGCTGCTCGA AAGCCTGTCG GTCGGCGAAA TCTCCGACGA GGATCTGGAC
GTCGCGCGCA AGCTGCTCGA GACGCGCAGC GCCGAGGAGA TCGCCGCCGC CTTCGTCCGC
ACCCAGCGGC AGAGCCTGCC GGCGCCCGAA GACCTGATCG ACGCCTCGCC GATCGCCCGT
GGCGACCGCG AACAGGCGAC CCGCGAGCAG GGTCCGCGCC CCGGTTTCGA GGACACGGTC
TGGTTCCGCA TGAACGTCGG GCGCGGCGCC AACGCCGATC CGCGCTGGCT GCTGCCGCTG
CTCTGCCGTC GCGGCCACAT CACCAAGCGC GAGGTCGGCG CGATCCGCAT CTTCCAGACC
GAGACCCGTT TCGAGATTCC GCGCGCCATC GCGGGCAAGT TCACCGACGC GCTGAAGCGC
ACCGCCGGGG AAGAGGACGG CGTCGTCATC GAACCCGCCG GCGACGCGCC GACCCCGCCC
CCCGCCCAGC TCCGCGACCG CCGCGGCCCG CCGCCGGGAG GCCCGCGCGG CCCCCGCGCT
CCGGGCGGCC CCGGCGGCTT CGGCGGGGCC CCGCGCGGCC ATGGCGGACC GAAGCGCTAC
GGCGCGAAAC CGTTCAAGGG CGGCGGTCGC AAGCCTTCGT GA
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| Protein sequence | MPFSSLPRPV AEAITERGYT APTPVQAQVI AAEAHDRDLL VSAQTGSGKT VAYGLAIAET
LLQGAEALPR AGEPLALIIA PTRELALQVQ RELQWLYAKL GARVVSCVGG MNVRVEQRQL
SYGCHIVVGT PGRLKDHLER GALQPGSLRA VILDEADEML DLGFREDLEE ILDLTPPERR
TLLFSATMPK PIALLAKRYQ RDALRIQTTS ERESHADIDY RAMAVAPADI QNAVVNVLRF
HEAKGAMVFC ATRENVRRLS ATLTERGFSA VTLSGELSQN ERNHALQALR DRRARVCVAT
DVAARGIDLP GLELVIHAEL PIDPETLQHR SGRTGRAGRK GTCVLITPYQ RRRHAERLLR
GANVNATWDK VPTPDEIYAR DQERLLESLS VGEISDEDLD VARKLLETRS AEEIAAAFVR
TQRQSLPAPE DLIDASPIAR GDREQATREQ GPRPGFEDTV WFRMNVGRGA NADPRWLLPL
LCRRGHITKR EVGAIRIFQT ETRFEIPRAI AGKFTDALKR TAGEEDGVVI EPAGDAPTPP
PAQLRDRRGP PPGGPRGPRA PGGPGGFGGA PRGHGGPKRY GAKPFKGGGR KPS
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