| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3796 |
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| Symbol | |
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| ID | 5199143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4165146 |
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| End bp | 4167452 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583351 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001264279 |
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| Protein GI | 148556697 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.42972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.172885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCTG TCAGGAAAGT CTGTGTGATC GGCGCCGGGA CGATGGGCGC CGGGATCGCG
GCGCAGGTCG CCAATGCCGG CGTGCCCGTG CTGCTGCTGG ACATCGTCCC CAAGGAGGGG
AGCAACCGGA ACGCCATCGC CGAGGGCGCG GTCGCGAAGA TGCTCAAGGC CGATCCGGCG
CCCTTCATGT CGAAGGCGGC GGCGAAGCTG ATCGAGACCG GCAATATCGA CGACGATCTC
GGCCGCGTCG CCGAGTGCGA CTGGATCGTC GAGGCGATCA TCGAGCGGCT CGACATCAAG
CAGGGCCTCT ACGAGAAGCT GGAGAAGGTC CGCAAGCCGG GGACGGCGGT GTCGTCGAAC
ACCTCGACCA TCCCGCTGGC GAAGCTGGTC GAGGGGCGGT CGGACGCGTT CGCGGCCGAC
TTCATGATCA CCCATTTCTT CAACCCGCCG CGCTACATGC GCCTGCTCGA ACGGGTCACC
GGTCCGAAGA CCGACCGGGC GACCGCCGCC AAGGTCGCCG ATTTCGGCGA CCGTGCGCTC
GGCAAGCGGG TCGTCGCGGC GAAGGACACG CCCGGCTTCA TCGCCAACCG CATCGGCACC
TACTGGATGC TGGTCGCGTA CAACGCCGCC AGCGACCTGG GCCTGACGGT CGAGGAGGCC
GACGCGATCG GCGGCAGGCC GATGGGCGTG CCCAAGACCG GCATCTTCGG CCTGATCGAC
CTGGTCGGCA TCGACCTGAT GCCGCTGCTG CTCAAGAGCC TCGGCTCGAC CCTGCCCGAG
GGCGACGCCT TCCACGCGGC GGTCCGGCCG ATGCCGCTGG TCGATCGGAT GATCGCCGAC
GGCTATACCG GCCGCAAGGG CAAGGGCGGC TTCTATCGCC TCAACCGCGA GGCCGGGAAG
CGCAAGGAGG CGATCGACCT CGCCACCGGC GACTATCGGC CGGTGATCAA GGCCGACGTG
CCGCGCGCCG CCCTGCCGCA ACTCGTCGCG CTGCCGGGCA AGACCGGCCA GTTCGCCTGG
GCGGTGCTGG GCCAGTTGCT CGCCTATGCC GCCGATCTGG TCGGCACGAT CGCCGACGAC
GTCGTCGCGA TCGATGACGC GATGAAGCTC GGCTACAACT GGAAATACGG CCCGTTCGAG
CTGATCGACC AGCTTGGGCC TGCCGCCTTC GCGCAGCGGC TCGCCGACGA GGGGCGGCCG
GTGCCGACGA TCCTGAAGAC CGCCGGCGAC CGCAGCTTCT ACCGGGTCGA GGGCGGCAAG
CGCCAGTATC TCGGCCTCGA CGGCGCCTAT CACGACGTCG TCCGGCCCGA GGGCGTGCTG
CTGCTGGAGG ACGTCAAGCT CGCCGCCAAG CCGATCCTCA AGAATGGCTC GGCCGCGCTG
TGGGACATCG GCGACGGCGT CGCCTGCTTC GAGTTCACCT CGAAGATGAA TGCCCTGGAC
GGCGATACGC TCAAGCTGCT CGGCCAGGCG ATCGAGCATG TCGGCAAGGG CATGAAGGCG
CTGGTCGTCT ACAATGAGGG GTCGAACTTC TCGGCGGGCG CCAATCTCGG CCTCGCCCTG
TTCGCGGTGA ACATCGCCGC CTGGGGCGAG ATCGAGAAGC TCGTCGCCGG CGGGCAGCAG
GCCTACAAGG CGCTCAAATA TGCGCCCTTC CCGGTGGTCT CGGCCCCGTC CGGGCTGGCG
CTTGGCGGCG GCTGCGAGAT ATTGCTCCAC TCGGACGCGA TCCAGGCGCA TGCCGAAAGC
TATATCGGCC TGGTCGAATG CGGCGTCGGC CTCGTCCCCG GCTGGGGCGG CTGCGGCGAA
TATATCGATC GCTGGGTCAA GTCGGGCCTG TTGCCCAAGG GGCCGATGCC CGCCGTCGCC
AAGGCGTTCG AGACGATCTC GACCGCGACC GTCGCCAAGT CGGCGGCCGA GGCGAAGGAG
CTGATGTTCC TGCGCAGGGA CGATGCGATC ACGATGAACC GCGACCGGTT GCTCGCCGAC
GCCAAGGCGA AGGCGCTCGC GCTGGTCGAC GGCTATCAGC CGCCCAGGCC GCCCGAGTTC
CGCCTGCCGG GACCGAGCGG CCGGGTCGCG CTGGCCATGG CGGCCGAGGG CTTCCACAAG
CGCGGCATGG CGACCGACTA TGACATGGTC GTCTCCGACG CGCTTGCGGG CGTGCTGACC
GGCGGCGATA CCGACCTCGT CGACGTGGTG GCCGAGGAGC AGATGCTCGC CCTCGAACGC
GCGGCCTTCC TCGAGCGGGT CCGCGACCCG AGGACGGTGG CGCGGGTCGA GACGATGCTC
GAAACCGGCA AGCCGCTGCG GAACTAA
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| Protein sequence | MGAVRKVCVI GAGTMGAGIA AQVANAGVPV LLLDIVPKEG SNRNAIAEGA VAKMLKADPA
PFMSKAAAKL IETGNIDDDL GRVAECDWIV EAIIERLDIK QGLYEKLEKV RKPGTAVSSN
TSTIPLAKLV EGRSDAFAAD FMITHFFNPP RYMRLLERVT GPKTDRATAA KVADFGDRAL
GKRVVAAKDT PGFIANRIGT YWMLVAYNAA SDLGLTVEEA DAIGGRPMGV PKTGIFGLID
LVGIDLMPLL LKSLGSTLPE GDAFHAAVRP MPLVDRMIAD GYTGRKGKGG FYRLNREAGK
RKEAIDLATG DYRPVIKADV PRAALPQLVA LPGKTGQFAW AVLGQLLAYA ADLVGTIADD
VVAIDDAMKL GYNWKYGPFE LIDQLGPAAF AQRLADEGRP VPTILKTAGD RSFYRVEGGK
RQYLGLDGAY HDVVRPEGVL LLEDVKLAAK PILKNGSAAL WDIGDGVACF EFTSKMNALD
GDTLKLLGQA IEHVGKGMKA LVVYNEGSNF SAGANLGLAL FAVNIAAWGE IEKLVAGGQQ
AYKALKYAPF PVVSAPSGLA LGGGCEILLH SDAIQAHAES YIGLVECGVG LVPGWGGCGE
YIDRWVKSGL LPKGPMPAVA KAFETISTAT VAKSAAEAKE LMFLRRDDAI TMNRDRLLAD
AKAKALALVD GYQPPRPPEF RLPGPSGRVA LAMAAEGFHK RGMATDYDMV VSDALAGVLT
GGDTDLVDVV AEEQMLALER AAFLERVRDP RTVARVETML ETGKPLRN
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