| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3793 |
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| Symbol | |
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| ID | 5199764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4162091 |
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| End bp | 4163401 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583348 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001264276 |
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| Protein GI | 148556694 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0891393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTT CGAATCTCCG CCGCATCGCG CTCGCGGGCG CCGCCTCGAC GATCGCGCTG
CTCGGCGCGG GCGCGGCCGA CGCCTCCGCC TTCTACCTGC AGGAACAGTC GGTGGTCGCC
GCCGGCCGCG CCTTCTCCGG CGAGGCGGCC GACCAGGGCG CCCAGTCGCT GTGGTGGAAT
CCCGCCGCGA TCGCCGGCAA CGAGAAGAGC ACCGCCTATC TCGGCTTCAG CGCGATCATG
CCCAAGGGCA AGGTCCGCAA CGTCGGGACG ATCATCGCCC GGCCGGGACA GGCCCCGGCG
CCGGTCGGCG GCAACCAGGT CTCGGTCGAT CCGCTCAACA AGGGCTACCT CCCCTCGGGC
GCGGTCGGCT GGAAGATCAA CGACCAGTGG TCGGTCGGCC TGGCGCTCAC CGCGCCCTAC
AGCTTCGCGA CCAATTACGA GAACAACAGC TGGGCGCGCT ACACCGCCGA CAAGACCAAG
CTGACGACGA TCGACCTGCA GCCGACGATC GCCTTTGCGC CGTCGCCGCT GATCGGCATC
GGCGTCGGCC TGAACATCGA GCGCAGCAAG GCGTCGCTGT CCAACTCGCT GCCCAACCTG
TCGCCGCTGC TGCCCGACGG GCACCAGACG CTGCGCGGCA AGGGCTGGGA CTTCGGCTGG
TCGGCCGGCG TCCAGATCCA TCCGAGCGAG ATCATCGACC TCGGCTTCTC CTACAAGTCG
TCGGTCAAGC ACAAGCTGAA GGGCAGCATC ACCACCGCCG GCCTGCTCGG CCCGCTCGGC
GGCCAGAACG GCCGGATCGA GGACATCACC GCCAGCTTCC GCACGCCGTG GCAGGCGATG
GCGAGCGCGC GCATCCACGT CAGCGACCAG CTCACCCTGA ACGGCCAGGT CGTCCGCGCC
GGCTGGAAGA AGTTCGACGC GATCCGCCTC GGCGCGCCGG TCAACGCCGC GCTCGACCAG
AACTACAAGA ACAGCTGGAG CGTGGCGGGC GGCGTCGACT ATGCCGTCAC CCCGCAATGG
ACGATGCGCG GCGGCGTGCA GTGGGACCAG ACGCCGACCC AGGACGGCTC CCGCGACGCG
CGCGTTCCCG ACGCCAGCCG GATCAACTTC GCGCTCGGCA CCTCCTATGC GATCACCGAG
TCGATCACGC TGGACGCGGC GGCCAATTAC GTCGACTTCA AGAACGCGTC GATCGATCGG
CTCGGCGGCT TCTATGTCGG CACCCCGGCA CAGACGATCA TCCGGCCCGA CGGCCGGCTG
ACCGGGGCCC ACGCGATCGT CCTGGCCGTC GGCGGCCGGA TGAGCTTCTG A
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| Protein sequence | MTISNLRRIA LAGAASTIAL LGAGAADASA FYLQEQSVVA AGRAFSGEAA DQGAQSLWWN
PAAIAGNEKS TAYLGFSAIM PKGKVRNVGT IIARPGQAPA PVGGNQVSVD PLNKGYLPSG
AVGWKINDQW SVGLALTAPY SFATNYENNS WARYTADKTK LTTIDLQPTI AFAPSPLIGI
GVGLNIERSK ASLSNSLPNL SPLLPDGHQT LRGKGWDFGW SAGVQIHPSE IIDLGFSYKS
SVKHKLKGSI TTAGLLGPLG GQNGRIEDIT ASFRTPWQAM ASARIHVSDQ LTLNGQVVRA
GWKKFDAIRL GAPVNAALDQ NYKNSWSVAG GVDYAVTPQW TMRGGVQWDQ TPTQDGSRDA
RVPDASRINF ALGTSYAITE SITLDAAANY VDFKNASIDR LGGFYVGTPA QTIIRPDGRL
TGAHAIVLAV GGRMSF
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