Gene Swit_3791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3791 
Symbol 
ID5199762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4159943 
End bp4160392 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID640583346 
ProductMerR family transcriptional regulator 
Protein accessionYP_001264274 
Protein GI148556692 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.23211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCCGA GGAAGCCAAG AAGGCGGCGA ACTGAGCCGA TGCCGGGACG CGCTATCGAA 
CCGGGCAGGG AGCGCCAGCC GCTCCAGGGC ATCCAGGATG TCGCCGACGA GCTCGGCGTC
ACCACCCGCG CCATCCGCTT CTACGAGGAC AAGGGGCTGC TCGATCCGCA GCGGGTCGGC
ACGATGCGCG TCTATTCGCG GCGGGAGGTC GCGCGGCTCC AGCTCATCCT GCGCGGCAAG
CGCCTCGGCT TCAGCCTGCG CGAGATCAAG GAGTTCCTCG ACCTCTACAC CGTCGATTCG
CTCCACCTCG CGCAGACCCG GCAGCTCCTG ACCCGCGTCG GCGCACGGAT CGACGCGCTC
GAACTGCAAC GCAAGGCGCT CGACCAGACC CTCGACGAGC TGCAGGACAT CGTCCGCCAG
TGCGAGGAAC GCATCGCCGC CACGGGTTGA
 
Protein sequence
MSPRKPRRRR TEPMPGRAIE PGRERQPLQG IQDVADELGV TTRAIRFYED KGLLDPQRVG 
TMRVYSRREV ARLQLILRGK RLGFSLREIK EFLDLYTVDS LHLAQTRQLL TRVGARIDAL
ELQRKALDQT LDELQDIVRQ CEERIAATG