| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3776 |
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| Symbol | |
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| ID | 5199242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4144640 |
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| End bp | 4145836 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583331 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001264259 |
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| Protein GI | 148556677 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.968608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG ATGAAGGTTC AGGCCTGAAG CCCGGCACCC GGCTGGTGAC GGCCGGGCGC
CACGCGAAGA ACCGCCGGGG GATCGTCAAT CCCCCGGTCT GGCGCGCGTC GACCATCTTG
TTCGACAGCG TCGCCGAATT GCGCGCCGGC GTCCGCAAGC CCGACGACGG GCTCTATTAC
GGCCGGCGCG GCACCCCGAC CCAATGGTCG CTGGCCGAGG CGCTGACCGA ACTCGAGCCG
GGCGCGGCGG GCACCGTCCT CTATCCGTCG GGCGTCGCGG CGATCAGCGC GGTGCTGCTG
TCGCTGCTCG CGCCCGGCGA CGAGCTGCTG ATGGTCGACA GCGCCTATGA GCCGAGCCGG
GCGATCTGCA ACGGCCTGCT CAGGCGCTTC GGCATAGAGA CCCGCTTCTA TGATCCGGCG
ATCGGCGCCG GCATCGCCGA CCTGATCGGC GATCGGACCC GCGTCGTCTT CCTCGAAAGC
CCCGGCAGCC TGACCTTCGA GGTGCAGGAC GTCCCCGCGA TCGCCGCCGC GGCGCGGGCG
CGCGGGGTGA CGACGGTGCT CGACAACACC TGGGCGACCC CGCTGCTCTT CCCCGCGCTC
GCGCACGGCG TCGACATCAG CATCCTCGCC TGCACCAAAT ATATCGTCGG CCATTCGGAC
GTGATGATGG GATCGGCGAC CGCCGTCCCC GGTCATTTCG AGAAGCTGCG GCGGACCAGC
CATGCGCTGG GCCAATGCGT CAGCCCCGAT GACGCCTATC TCGCCGCGCG CGGCCTGCGC
ACCCTGCAGC TCCGCCTGCG CCAGCATGAG GAGGGCGCGC TCGCCGTGGC GCGCTGGCTG
GCCGAACAGC CGCAGGTCGC GCGGGTGCTC CATCCGGCCC TGCCCGACTG CCCCGGCCAT
GAACTGTGGA AGCGCGATTT TTCGGGCGCA TCGGGGTTGT TCAGCATCGT CCTGGACGGC
GGCGACGATG CGGCGCGGGC GGCGCTGATC GACGGACTCG ACCTGTTCGG GATCGGCTTC
TCCTGGGGCG GCTATGAGAG CCTGGCGCTG CCGGTCGATC CGGCGGGCCT GCGCACCGCC
ACCTCGTGGC AGGCGGAAGG GCCGGCCATC CGCCTCCACA TCGGAATCGA GGACCCGGCG
GACCTGATCG CCGACCTCGG ACGCGGCCTG GCCCGATTCG AATCGGCGCG GGGCTGA
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| Protein sequence | MTDDEGSGLK PGTRLVTAGR HAKNRRGIVN PPVWRASTIL FDSVAELRAG VRKPDDGLYY
GRRGTPTQWS LAEALTELEP GAAGTVLYPS GVAAISAVLL SLLAPGDELL MVDSAYEPSR
AICNGLLRRF GIETRFYDPA IGAGIADLIG DRTRVVFLES PGSLTFEVQD VPAIAAAARA
RGVTTVLDNT WATPLLFPAL AHGVDISILA CTKYIVGHSD VMMGSATAVP GHFEKLRRTS
HALGQCVSPD DAYLAARGLR TLQLRLRQHE EGALAVARWL AEQPQVARVL HPALPDCPGH
ELWKRDFSGA SGLFSIVLDG GDDAARAALI DGLDLFGIGF SWGGYESLAL PVDPAGLRTA
TSWQAEGPAI RLHIGIEDPA DLIADLGRGL ARFESARG
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