Gene Swit_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3771 
Symbol 
ID5198297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4139275 
End bp4140432 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content71% 
IMG OID640583326 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001264254 
Protein GI148556672 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGC CGAGACTGGT CGCCGAAAGC GCCGACATCT CGCCGATCGA GGAGATCATC 
GCCGAGGCGC GGGCGGGGCG GCCGTTCATC CTGGTCGATT CGGAGGACCG CGAGAATGAG
GGCGACCTGA TCGTCCCCGC CCAGTTCGCG ACGCCCGAGG CGGTCAACTT CATGGCGGTG
CACGGGCGCG GGCTGATCTG CCTGTCGCTG ACCGCCGATC GCATCGCGGC GCTGCGGCTG
CCGCCGATGG CGCAGGACAA CCGCACCCAG CACGGCACCG CCTTCACCGT GTCGATCGAG
GCGCGCGAGG GGATCACCAC CGGCATCTCC GCGCACGACC GGGCGCGCAC CATCCAGGTC
GCCGCCGATC CCGATCGCGG GCCGGCCGAC ATCGTCTCGC CCGGCCATGT CTTCCCGCTC
GCCGCGCGCG ACGGCGGCGT GCTCGTCCGC GCCGGACATA CCGAGGCGTC GATCGACATC
GCCCGGCTCG CCGGCCTGCG CCCCGCCGCG GTGATCTGCG AGATCATGAA CGACGACGGC
ACGATGGCGC GCCTGCCCGA CCTGCTCGGC TTCGCCGCGC GCCACGGGCT GAAGATCGGC
ACGATCGCCG ACCTCATCGC CTATCGCCGT CGTACCGAGC GCCATGTCGT GCGCGAGCTG
GAGCGCGACT TCGACACGAT CCACGGCCGC TTCCGGCTGG TCGCCTATCG CAACCTGCTC
GACAACAGCC TCCACATCGC GCTGGCCAGG GGGGTGATCG ACCCCGATGC GCCGGTGACG
GTGCGCATGC ACCGGCTGGA GTTCGGCCCC GACGTGCTGG GGATGAGCGG CGACCGGCAT
AGCTGCCTGA GCAACGCGAT GAAGACGATC GCGGACGAGG ACGGCCCCGG CGTGATCGTG
CTGCTCAAGG ACTGGGACCC CGACTGGCTG TTGCGCCAGC TCGGCCCCGC CGACGCCCAT
ACCTGCCAGA CGCGCGCGCT GCGCGACTAC GGCATCGGCG CGCAGATCCT GATCGACCTG
GGGGTGCGCA AGATGGTGCC GATCACCTCG GCCCGGCCCA ATCCGGCGGC GCTGCCCGGC
TATGGGCTGA CGATCGTCGG CTGGCGGCTG TTCGGCAAGG ACGGCGTTCC CGAGGACGAG
GTGACTTTGT TCGACTGA
 
Protein sequence
MAVPRLVAES ADISPIEEII AEARAGRPFI LVDSEDRENE GDLIVPAQFA TPEAVNFMAV 
HGRGLICLSL TADRIAALRL PPMAQDNRTQ HGTAFTVSIE AREGITTGIS AHDRARTIQV
AADPDRGPAD IVSPGHVFPL AARDGGVLVR AGHTEASIDI ARLAGLRPAA VICEIMNDDG
TMARLPDLLG FAARHGLKIG TIADLIAYRR RTERHVVREL ERDFDTIHGR FRLVAYRNLL
DNSLHIALAR GVIDPDAPVT VRMHRLEFGP DVLGMSGDRH SCLSNAMKTI ADEDGPGVIV
LLKDWDPDWL LRQLGPADAH TCQTRALRDY GIGAQILIDL GVRKMVPITS ARPNPAALPG
YGLTIVGWRL FGKDGVPEDE VTLFD