| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3765 |
|---|
| Symbol | |
|---|
| ID | 5196607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4129811 |
|---|
| End bp | 4131298 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640583320 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001264248 |
|---|
| Protein GI | 148556666 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.378557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCT TTGCTCTTTG GTCGCGACGC CGCTTCCTGC AGGCCACCGC CGTCTCGATC
CCCGTGGCGA CGGCCCTGTC CGGTGCCGAG GGCTTCGCCG CGCCGGCGAA GGGCAGCGAC
GCCGCAGCGC TCCAGGCGCG GATCGCCGGC ACCGTCGTCG TCAAGGGCGA CGACGGCTAC
GAGACCTGGC GCGAGGCGAT GATCTGGCAG CGGGCGAAGG CCGACCGGCG GCCCGACATG
ATCGTCCAGG TCGAGCGGGT CGAGGACGTG CAGGAGGCCG TCCGCTTCGC CGCCGCCAAC
GGGATGAAGG TCACCACCCG CTGCGGCGGC CACAGCATGG CCGCCTGCTT CCTGCGGGAC
CGCGGCATGC TGATCGACGT CAGCCGGCTC GACGGGATCG CCGTCGACAA GGCCCCGAAG
GTCGCGACGG TCGGCCCCGG CGTCTTCTCG CGCGGGCTGG CCGAGCGGCT GGCGGAGGAC
GATCTCGCCT TTCCCGGCGC CCATTGCGGC ACCGTGCCGA TCAGCGGCTT CCTGCTCGGC
GGCGGCGTCG GGCTGAACAC CAATGCCTGG TCGCAGGGGA TGAGCGTGTT CGCCGTCAAG
GCGGTCGACA TCGTCACCGC CGACGGCCGG CTGCTGCGCG CCAGCGAGAC CGAGAACCGC
GACCTGTTCT GGGCCGCTCG CGGCGGCGGT CCGGGCCTGT TCGGCGTGGT CGTCCGCTTC
CACCTGCAAT GCTTCGACGC GCCCAAGGTG ATCTGGGGCG CGAGCTACAC CTTCGCCTAT
GGCGAGCTCG ACGCGGTCAC GCGGGTCATG GACACCGTCG TCCCGCGGCT CGACAAGGAT
GTCGAGGTGC TGTTCGCGGT CGCCGCCGCG CCCGACGTCG CCGAGGACGC GCCGGTCGAG
CAGCGCCAGC GCATCTATCT CGACATCAAC GCCTTCGTCG CAAGCGAGGC CGAGGGCCGG
CGCAAGCTCG CCCCGCTGCT GGGCGATCCG CTGATCGCCC GCGCGATCGA CCGGATCGAG
AACCGCGCCG GCAATTTCGA CCGCTATTAT AGCGACAACG AGGCGTCCTT CCCGCAGGGC
TACTGGATGG GCGACGACGC CTGGATCGAC CGGCCGATGG AAGCGGTCGA GATATTGAAG
CGGCACATCC CCAACTGCCC GGCGCCGCGC GGCACGCCGC TGCTGCTCTA CATGGGCACC
AACAAGATGC CCGACGCCGC CTGCTCGCGG ATCGGCCGCT TCTACCTCGC TTATTACATG
GAATGGGACG AGCCCGCGCA GGAAGCCGCC AGCCGCGCCT ATTGCCTCAA GCTGTTCAAG
GAACTGAAGT CCGTCTCCAG CGGCAGCTAC ATCAACGAGA TGGACCAGGA GGGGCGGCCC
GAGGACATCC GCGACTGCTA CTCCCCCGAG GCCTGGGCCC GGCTCGCCAG GCTGCGCCGG
CAATGGGACC CCAAGGGGGT GTTCCACGGA TTTTACGGCC AGTCATGA
|
|---|
| Protein sequence | MSRFALWSRR RFLQATAVSI PVATALSGAE GFAAPAKGSD AAALQARIAG TVVVKGDDGY
ETWREAMIWQ RAKADRRPDM IVQVERVEDV QEAVRFAAAN GMKVTTRCGG HSMAACFLRD
RGMLIDVSRL DGIAVDKAPK VATVGPGVFS RGLAERLAED DLAFPGAHCG TVPISGFLLG
GGVGLNTNAW SQGMSVFAVK AVDIVTADGR LLRASETENR DLFWAARGGG PGLFGVVVRF
HLQCFDAPKV IWGASYTFAY GELDAVTRVM DTVVPRLDKD VEVLFAVAAA PDVAEDAPVE
QRQRIYLDIN AFVASEAEGR RKLAPLLGDP LIARAIDRIE NRAGNFDRYY SDNEASFPQG
YWMGDDAWID RPMEAVEILK RHIPNCPAPR GTPLLLYMGT NKMPDAACSR IGRFYLAYYM
EWDEPAQEAA SRAYCLKLFK ELKSVSSGSY INEMDQEGRP EDIRDCYSPE AWARLARLRR
QWDPKGVFHG FYGQS
|
|---|
| |