| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3761 |
|---|
| Symbol | |
|---|
| ID | 5196603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4125634 |
|---|
| End bp | 4126929 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640583316 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001264244 |
|---|
| Protein GI | 148556662 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCCAA GCATCACTCC GGTCCAGACC TCACAGGAGA TGCCGCGATC GACGACGGTG
GCCGTGATCG GCGGCGGCAT CGTCGGCCTG ATGGCCGCGC TGACGCTGGC CGAGCGCGGC
ATCCCCGTGA CCGTCCTCGA AAAGGGTCGG ATCGCGGGCG AGCAGTCGTC GCGCAACCTC
GGCTGGATCC GCAAGATCGG ACGCGAGGAG CATGACCTGC CGCTCTCGCT GGCGTCCGAA
CGGCTGTGGA CGGCGATGGT CGATCGGGTC GGCGCCGACG TCGGCTATCG CCGCGCCGGG
ATCATGTACG TCGCCCGGAC CGAGGCGGAG ATGGCCGGGC ACCGCGCCTG GCTGGACGCG
GTCGGTAACG CGCTCGACGC GCGCCTGCTG ACCCCCGGCC AGATCGACCA GCTCGTGCCC
GGCGGCACCG GCGGCTGGGC GGGCGGCATC CACTCGCCGA CCGACGGGCG CGCCGAGCCC
AGCCTCGCGG CGAGCGCGAT CGCCCGCGCC GCACTGGCGA AGGGCGCGGT CATCGTCGAG
GATTGCGCGG TCCGCACCCT GTCGATGGCG GCCGGCCGGG TGTCCGGCGT CGTCACCGAG
CGCGGCGAGA TCGGCTGCGA CCAGGTCATC CTCGCCGGCG GCCTGTGGTC GCGGCGCTTC
CTCGGCAATC TCGGCGTGTC GCTGCCCACC CTGCCGCTGA TCGCCTCGGT CCTGCGCACC
GCGCCGATGG AGGGCCCGAC CGAGATCGCG GTCGGCGCGC CCGACTTCTC GTTCCGCAAG
CGCGCCGACG GCGGCTACAC GATCACCCAG CGCGGCGGCT TCGTCGCGCC GCTGGTCCCC
GACAGCCTGT TGATCGGCCA TCGCTATCTG CCGATGCTGC GCGCGCAGTG GCGGAACGTG
CGGCTCTCGC TCGGCCGCGC CTTCGTCGAC GACCTCGCGC TCGGGCGCCG CTGGAACGCA
GCGGCGACAT CACCGTTCGA GCGGGTCCGG ACGATGGACC CGCCGGTGAA CGAGGGCCTC
AACGCCGAGG CGATGCGCAA CCTGATCGCC GCCTGGCCGG TGTTCGGCAA CGCCGTGATC
GAGGAAAGCT GGGCCGGCGC GATCGACGTC ACCCCGGATT CGCTGCCGGT CATCTCGCCG
GTCGCGAAGC TGCCCGGCCT GACCCTCGCC TCGGGCTTCT CGGGCCATGG ATTCGGCACC
TCGCCCGCCG CGGGCCAGCT CGCCGCCGAT CTCGCCACCG GTGCGACGCC GATCGTCGAC
CCCGCCTTCT ACCGGCTCGA ACGGCTCAGA GCCTGA
|
|---|
| Protein sequence | MAPSITPVQT SQEMPRSTTV AVIGGGIVGL MAALTLAERG IPVTVLEKGR IAGEQSSRNL
GWIRKIGREE HDLPLSLASE RLWTAMVDRV GADVGYRRAG IMYVARTEAE MAGHRAWLDA
VGNALDARLL TPGQIDQLVP GGTGGWAGGI HSPTDGRAEP SLAASAIARA ALAKGAVIVE
DCAVRTLSMA AGRVSGVVTE RGEIGCDQVI LAGGLWSRRF LGNLGVSLPT LPLIASVLRT
APMEGPTEIA VGAPDFSFRK RADGGYTITQ RGGFVAPLVP DSLLIGHRYL PMLRAQWRNV
RLSLGRAFVD DLALGRRWNA AATSPFERVR TMDPPVNEGL NAEAMRNLIA AWPVFGNAVI
EESWAGAIDV TPDSLPVISP VAKLPGLTLA SGFSGHGFGT SPAAGQLAAD LATGATPIVD
PAFYRLERLR A
|
|---|
| |