Gene Swit_3743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3743 
Symbol 
ID5199460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4106588 
End bp4107232 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID640583298 
Product1-Cys peroxiredoxin 
Protein accessionYP_001264226 
Protein GI148556644 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG TGGCCGCCCC CTCCATGCCC CGGATCAACG AACCGGCGCC GGCCTTCAAG 
GCAAAGACCA CCCACGGCGA ACGCTCGCTC GACGATTACA AGGGCAAGTG GCTGGTCCTC
TTCTCCCACC CCGCGGACTT CACCCCGGTC TGCACGACCG AGTTCATGGG CTTCGCGAAG
GCGGCCGATC GCTTCAAGGC GCTCAATTGC GAGCTGCTGG GCCTCTCCAT CGACTCCGTG
CATTCGCACA TCGCCTGGAT GCGCAGCATC GAGGAGAAGT TCGGCGTCGA GATCACCTTC
CCGATCATCG ACGACCTGTC GATGAACGTC GCCAGGGCCT TCGGCATGAT CCATCCCGGC
GCGTCGGACA CCTCCGCCGT GCGGGCGACC TTCCTGATCG ACCCCGAAGG CGTCATCCGG
GCAATGGTCT ATTACCCGAT GTCGAACGGC CGCTCGGTCG ACGAGTTCGT CCGCCTGCTG
ACCGCGCTTC AGACGTCCGA CGCGAACAAG GTCGCGACGC CCGAAAACTG GCAGCCCGGT
GAACCCGTGA TCGTGCCGCC GCCCGCGACC GCCGAGGCCG CCAAGGCGCG CAAGGACGAG
GGCTACGACT ACACCGACTG GTATTTCAGC AAGAAGACAC TCTGA
 
Protein sequence
MTDVAAPSMP RINEPAPAFK AKTTHGERSL DDYKGKWLVL FSHPADFTPV CTTEFMGFAK 
AADRFKALNC ELLGLSIDSV HSHIAWMRSI EEKFGVEITF PIIDDLSMNV ARAFGMIHPG
ASDTSAVRAT FLIDPEGVIR AMVYYPMSNG RSVDEFVRLL TALQTSDANK VATPENWQPG
EPVIVPPPAT AEAAKARKDE GYDYTDWYFS KKTL