Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3743 |
Symbol | |
ID | 5199460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4106588 |
End bp | 4107232 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640583298 |
Product | 1-Cys peroxiredoxin |
Protein accession | YP_001264226 |
Protein GI | 148556644 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACG TGGCCGCCCC CTCCATGCCC CGGATCAACG AACCGGCGCC GGCCTTCAAG GCAAAGACCA CCCACGGCGA ACGCTCGCTC GACGATTACA AGGGCAAGTG GCTGGTCCTC TTCTCCCACC CCGCGGACTT CACCCCGGTC TGCACGACCG AGTTCATGGG CTTCGCGAAG GCGGCCGATC GCTTCAAGGC GCTCAATTGC GAGCTGCTGG GCCTCTCCAT CGACTCCGTG CATTCGCACA TCGCCTGGAT GCGCAGCATC GAGGAGAAGT TCGGCGTCGA GATCACCTTC CCGATCATCG ACGACCTGTC GATGAACGTC GCCAGGGCCT TCGGCATGAT CCATCCCGGC GCGTCGGACA CCTCCGCCGT GCGGGCGACC TTCCTGATCG ACCCCGAAGG CGTCATCCGG GCAATGGTCT ATTACCCGAT GTCGAACGGC CGCTCGGTCG ACGAGTTCGT CCGCCTGCTG ACCGCGCTTC AGACGTCCGA CGCGAACAAG GTCGCGACGC CCGAAAACTG GCAGCCCGGT GAACCCGTGA TCGTGCCGCC GCCCGCGACC GCCGAGGCCG CCAAGGCGCG CAAGGACGAG GGCTACGACT ACACCGACTG GTATTTCAGC AAGAAGACAC TCTGA
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Protein sequence | MTDVAAPSMP RINEPAPAFK AKTTHGERSL DDYKGKWLVL FSHPADFTPV CTTEFMGFAK AADRFKALNC ELLGLSIDSV HSHIAWMRSI EEKFGVEITF PIIDDLSMNV ARAFGMIHPG ASDTSAVRAT FLIDPEGVIR AMVYYPMSNG RSVDEFVRLL TALQTSDANK VATPENWQPG EPVIVPPPAT AEAAKARKDE GYDYTDWYFS KKTL
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