Gene Swit_3742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3742 
Symbol 
ID5199459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4105935 
End bp4106378 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID640583297 
Productthioredoxin 
Protein accessionYP_001264225 
Protein GI148556643 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGT CCCAGCTTGT GGTTTGCCCG GTCTGTGCGA GCATCAACCG GGTTCCGGCT 
GCGAAGATCG GCGCTGCGCC CAATTGCGGG CGATGCTCGA TGCCGCTGTT CCAGGGCCAG
CCTGTCGATG TCGATGCCAC CGCCTTCGAC CGCCATGTGG GGCGCGGAAG TCTGCCTGTT
CTCGTGGATT TCTGGGCGAG CTGGTGCGGG CCGTGCCGCG CGATGGCCCC GGCGTTCAAG
GCGGCCGCCG CCGAACTGGA ACCGCATGTC CGTCTGCTGA AGGTCGATAC CGAGGCCGAG
CAGGGCATAT CGGGGCGCTA CCGCATCCAG TCGATCCCGA CGCTGATACT CTTCAAGGGC
GGCCGCGAGA TCGCACGTCA GGCCGGGGCG ATGGACCGCG CCCGACTCGT CGCATGGGTA
AGACAGGCTC TCGCCGCCGC CTGA
 
Protein sequence
MSESQLVVCP VCASINRVPA AKIGAAPNCG RCSMPLFQGQ PVDVDATAFD RHVGRGSLPV 
LVDFWASWCG PCRAMAPAFK AAAAELEPHV RLLKVDTEAE QGISGRYRIQ SIPTLILFKG
GREIARQAGA MDRARLVAWV RQALAAA