Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3742 |
Symbol | |
ID | 5199459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4105935 |
End bp | 4106378 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640583297 |
Product | thioredoxin |
Protein accession | YP_001264225 |
Protein GI | 148556643 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGT CCCAGCTTGT GGTTTGCCCG GTCTGTGCGA GCATCAACCG GGTTCCGGCT GCGAAGATCG GCGCTGCGCC CAATTGCGGG CGATGCTCGA TGCCGCTGTT CCAGGGCCAG CCTGTCGATG TCGATGCCAC CGCCTTCGAC CGCCATGTGG GGCGCGGAAG TCTGCCTGTT CTCGTGGATT TCTGGGCGAG CTGGTGCGGG CCGTGCCGCG CGATGGCCCC GGCGTTCAAG GCGGCCGCCG CCGAACTGGA ACCGCATGTC CGTCTGCTGA AGGTCGATAC CGAGGCCGAG CAGGGCATAT CGGGGCGCTA CCGCATCCAG TCGATCCCGA CGCTGATACT CTTCAAGGGC GGCCGCGAGA TCGCACGTCA GGCCGGGGCG ATGGACCGCG CCCGACTCGT CGCATGGGTA AGACAGGCTC TCGCCGCCGC CTGA
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Protein sequence | MSESQLVVCP VCASINRVPA AKIGAAPNCG RCSMPLFQGQ PVDVDATAFD RHVGRGSLPV LVDFWASWCG PCRAMAPAFK AAAAELEPHV RLLKVDTEAE QGISGRYRIQ SIPTLILFKG GREIARQAGA MDRARLVAWV RQALAAA
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