Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3717 |
Symbol | |
ID | 5198328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4081691 |
End bp | 4082392 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640583273 |
Product | hypothetical protein |
Protein accession | YP_001264201 |
Protein GI | 148556619 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.752058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAT TGAGAGCCCA TCCTGAGCGC CATGCGGTGT CCCGCATCGG CTGGCTGCGC GCGGCAGTGC TGGGCGCCAA TGACGGCATC GTCTCTACCG CGAGCCTGAT CGTCGGCGTC GCGGCTTCTG GAGCCGACAA GACCAGCATT TATGTGGCGG GCACCGCCGC GCTGGTGGCG GGCGCCATGT CGATGGCCGC CGGCGAATAT GTTTCTGTCA GCTCTCAGGC TGATACGGAG AAGGCCGATC TCGCACGCGA GACGGGTGAA CTTGTCGATC AGCCTGATTT CGAACGCCAG GAGTTGACAG ACATCTATGT CGCGCGCGGG TTAGACGAGA ATCTGGCCCT GCAGGTCGCT GATCAGCTTA TGGCCCACGA TGCGCTAAGC GCCCACGCGC GCGATGAGCT GGGGATTTCC GAGGTGGTGA GCGCGCGCCC GCTCCAGGCC GCTTTGACTT CGGCGCTGAC CTTCAGCGCT GGCGCGCTCA TGCCGCTGCT TCTCGTCTCC ATCGCGCCGC AAGCCAACCT TGTGCCGATC GAGGTGGTCG CAACTCTGTT GTTTCTGGCC ATTCTCGGTG CGCTTGGGGC CTGGACCGGA GGCGCGCCGC CCACGCGATC GGTGCTGCGG GTCACCTTCT GGGGGGCGCT GGCGCTGGCG GCGACCGCCG GTATCGGACG GCTGTTCGGA ACGGTCGTGT AG
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Protein sequence | MSRLRAHPER HAVSRIGWLR AAVLGANDGI VSTASLIVGV AASGADKTSI YVAGTAALVA GAMSMAAGEY VSVSSQADTE KADLARETGE LVDQPDFERQ ELTDIYVARG LDENLALQVA DQLMAHDALS AHARDELGIS EVVSARPLQA ALTSALTFSA GALMPLLLVS IAPQANLVPI EVVATLLFLA ILGALGAWTG GAPPTRSVLR VTFWGALALA ATAGIGRLFG TVV
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