Gene Swit_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3717 
Symbol 
ID5198328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4081691 
End bp4082392 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content66% 
IMG OID640583273 
Producthypothetical protein 
Protein accessionYP_001264201 
Protein GI148556619 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.752058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAT TGAGAGCCCA TCCTGAGCGC CATGCGGTGT CCCGCATCGG CTGGCTGCGC 
GCGGCAGTGC TGGGCGCCAA TGACGGCATC GTCTCTACCG CGAGCCTGAT CGTCGGCGTC
GCGGCTTCTG GAGCCGACAA GACCAGCATT TATGTGGCGG GCACCGCCGC GCTGGTGGCG
GGCGCCATGT CGATGGCCGC CGGCGAATAT GTTTCTGTCA GCTCTCAGGC TGATACGGAG
AAGGCCGATC TCGCACGCGA GACGGGTGAA CTTGTCGATC AGCCTGATTT CGAACGCCAG
GAGTTGACAG ACATCTATGT CGCGCGCGGG TTAGACGAGA ATCTGGCCCT GCAGGTCGCT
GATCAGCTTA TGGCCCACGA TGCGCTAAGC GCCCACGCGC GCGATGAGCT GGGGATTTCC
GAGGTGGTGA GCGCGCGCCC GCTCCAGGCC GCTTTGACTT CGGCGCTGAC CTTCAGCGCT
GGCGCGCTCA TGCCGCTGCT TCTCGTCTCC ATCGCGCCGC AAGCCAACCT TGTGCCGATC
GAGGTGGTCG CAACTCTGTT GTTTCTGGCC ATTCTCGGTG CGCTTGGGGC CTGGACCGGA
GGCGCGCCGC CCACGCGATC GGTGCTGCGG GTCACCTTCT GGGGGGCGCT GGCGCTGGCG
GCGACCGCCG GTATCGGACG GCTGTTCGGA ACGGTCGTGT AG
 
Protein sequence
MSRLRAHPER HAVSRIGWLR AAVLGANDGI VSTASLIVGV AASGADKTSI YVAGTAALVA 
GAMSMAAGEY VSVSSQADTE KADLARETGE LVDQPDFERQ ELTDIYVARG LDENLALQVA
DQLMAHDALS AHARDELGIS EVVSARPLQA ALTSALTFSA GALMPLLLVS IAPQANLVPI
EVVATLLFLA ILGALGAWTG GAPPTRSVLR VTFWGALALA ATAGIGRLFG TVV