| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3712 |
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| Symbol | |
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| ID | 5201031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4074915 |
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| End bp | 4077986 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583268 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001264196 |
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| Protein GI | 148556614 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTT CGCTCGTCGC CACGGCGCTT TCTTACCGCC TGCTTGTTCT TGTGCTCGCC
ACAATCACAG CGGGGCTTGG CGTCTGGGCC TTCACCACCT TGCCCGTCGA TGCTTACCCG
AACATCGCGC AGACGCAGGT GAAGCTGATC CTCAAGGCCC CCGGCATGAC GCCGGAGGAG
GTCGAAAGCC GCGTCATCAC ACCGATCGAG ACGGAGATGC TCGGCATCCC CCATCAGGCA
ATCCTGCGCT CGACCGCCAA ATATGCCATT GCCGACATCA CGATCGACTT CACCGACGGC
ACCGACATCT ATTGGGCGCG CCAGCAGGTC ACCGAACGCC TCTCGGGCGT CATGGGCGAT
CTGCCGGCAT CGGTGAGCGG CGGCCTCGCC CCGATCTCGA CTCCGCTCTC CGACGTCTAC
ATGTTCACCA TCGAAGGGCC GCTGTCGCTC CAGCAGAAGC GCGAACTGCT CGACTGGACG
ATCCGGCCCG CGCTGCGCAC GGTGCCCGGC GTCGCCGATG TCAACGCGCT GGGCGGTTAT
GTCCGCACGT TCGAGGTCAG GCCCGATCCC GTCGCGCTGG CGAGCGCGAA ACTCTCCGTG
GCCGACCTGC GCACCGCAAT CGAAAGCGGC AACCGCAATG ACGGCGCGGG CCGCCTCGCG
AGCGGCGAGG AAGCACTGAT CGTCCGCGCG GTGGGCGCGA TCCGCACCGT CGAGGATCTG
GGGTCGCTCG TCATCGCCAG CCGCGACGGA CGGATCGTCC GGCTCGGCGA TGTCGCCACC
GTCGGCATTG GCAGTCTCAC TCGTTATGGC GCGGTCGCGC GCGGCGGCAA AGCCGAAGCC
GTGCAGGGTC TCGTCATCGC GCTGCGCGGC GCGGACGCCC GCCAGGTGGT CGATGGCGTG
CGGACACGGC TCGCCGAGAT GCAGAGTGGC CTGCCCGAAG GCACGCAAAT CCATGTCTTC
TACGACCGCT CCGATCTGAT CGAGCGCGCG GTCGGCACGG TCGAGAAGGC GTTGCTGGAG
GCGACCGTGC TGGTCGTCGT GCTGCTGATT CTGTTTCTCG GCGACTGGCG AGCCGCCGCG
ATCGTCGCGG TGACCTTGCC GATGGCGGCG CTCATCACCT TCCTGTTCAT GCGCGGCATG
GGGCTGTCCG CCAATCTGAT GAGCCTGGGC GGCCTCGCCA TCGCGATCGG GCTGCTGGTC
GATGGCGCGG TGGTCGTGGT CGAGAATGTC GTCGAGCGGC TGGGGCACGC GCATGGCGAG
GATACGCCCC GGCTGAACCT TGTATTCCGC GCGACCAGCG AGGTGATCGC GCCGGTGTCG
GCGGGCATCG TCATCATCGC GCTGGTGTTC CTGCCGCTGC TGTCGTTGCA GGGGCTGGAG
GGCAAGCTGT TCGCGCCGGT CGCGCTCACT ATCGTCTTTG CCCTGCTCGG GTCTTTGCTG
CTCGCGCTGA CGCTTGTGCC GGTGCTCGCC TCCTTCGGCC TCAGGAGCGG CCATCATGGC
GATCCGTGGA TCATGCGCCA GCTTGGCCCG CGCTATCGCG CGCTGTTGGA CGGCGCGTTC
GCGCGCAAGC GTCTGGTCTA TGGCCTGTCC GCCGCCGGGC TGGTGCTGGC GGGTCTGGCA
TATGGCGCGG TCGGCAAGAC GTTCATGCCG ACGATGGACG AGGGTTCGGT GATCGTCCAG
CTCACCAAGC TGCCGTCGAT CAACCTTAGT CAGTCGGTCG CCGGTGACAT GGCCGTGCAG
CGCGCGCTCC TCACCGTGCC GGAGGTCGAG GATGTGATCG CGCGCGTCGG TTCCGACGAG
ATCGGGCTCG ACCCCATGGG CCTCAATGAG ACCGACAGTT TCGTCCAGTT GAAGCCGCGA
TCTGAGTGGC GGGGCAACAA GGACTTCGTG GTCGAGGAAA TCCGCAAGGC GCTCGAGGGA
TTGCCCGGCA TTGAGGCCAG CTTCACCCAA CCGATCGAAA TGCGCGTCTC GGAGATGCTG
ACCGGCGCGC GCGGCGATCT TGCGGTGAAG ATATTTGGTC CAGATTCACA GATGCTCGCC
GATCTGGCGG GCCAGGTCCA GCACACGCTG TCCGGCATCC AGGGCGCCTC GGAAGTGCTG
ACGGTCGCCA ATGACAGCGT GGATTATCTC CAGCTCGATA TCGATCGCGC GGCGACGGGA
CGGTTCGGAA TGCCGGTCGA CCAGATGCAG GATGCGCTCC GCGCGCAGGT TGAAGGTGTT
CACGCCGGGA TCGTCGCCGA TGGGCAGAAG CGCGTGCCTA TCGTGATCCG CGGCGATGAC
AGCATCCGCA ATGATCCGGC CCGCTTCGCC GATCTGCAAC TGCGCACACC CGATGGCACG
CTGGCGCGCG TCAGCGACAT GGCGCGGGTG GAGCGGACGC AGGGTCCGGT GAAACTCGAC
CATGAGAACG GCTCGCGCTT CGCACTTGTG CAGGCGTTCG TCTCGGGACG CGACCTGGTC
GGCTATGTCG ATGAGGCCAA GGCGGCCGTC GCTGCCAGGG TCAGGCTGCC TGCGGGTTAC
AGCATCGTCT GGGGCGGCCA GTTCGAAAAC CAGCAGCGCG CGTCGGCGCG GCTGATGCTG
GTGATCCCGA TCGCATTGGC GCTGATCTTT CTCGTCCAGC TGGCAACGCT CCGCTCACTC
AGGGCATCGT TGCTCATCCT CGCGAATATC CCGTTCGCGA TGGTCGGCGG GCTGCTCTCG
CTCTGGCTGT CGGGTGAATA TCTCTCCGTT CCCGCATCGG TGGGGTTCAT CGCGCTGCTC
GGCATCGCCG TGCTCAACGG ATTGGTGCTG GTCGCCTATT TTCGTCAGCT CCGCGCCGAG
GGGCTGAGCA TGGCCGAAAC GGTGCGGCTG GGTGCGCAGC GGCGACTGCG GCCCGTCCTG
ATGACCGCCA GCATCACGGC TTTCGGCCTC GTACCCTTGC TGTTCGCCAG CGGACCGGGA
TCCGAAATCC AGCGGCCGCT GGCGATCGTA GTGATCGGCG GTCTCATCAC CTCCACTTTG
CTGACGTTGA TCCTGCTGCC GATCCTGTTC GAGCGCTTCG GCGAAAGCGT TGAGGAAATC
GCGAATGTCT GA
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| Protein sequence | MLRSLVATAL SYRLLVLVLA TITAGLGVWA FTTLPVDAYP NIAQTQVKLI LKAPGMTPEE
VESRVITPIE TEMLGIPHQA ILRSTAKYAI ADITIDFTDG TDIYWARQQV TERLSGVMGD
LPASVSGGLA PISTPLSDVY MFTIEGPLSL QQKRELLDWT IRPALRTVPG VADVNALGGY
VRTFEVRPDP VALASAKLSV ADLRTAIESG NRNDGAGRLA SGEEALIVRA VGAIRTVEDL
GSLVIASRDG RIVRLGDVAT VGIGSLTRYG AVARGGKAEA VQGLVIALRG ADARQVVDGV
RTRLAEMQSG LPEGTQIHVF YDRSDLIERA VGTVEKALLE ATVLVVVLLI LFLGDWRAAA
IVAVTLPMAA LITFLFMRGM GLSANLMSLG GLAIAIGLLV DGAVVVVENV VERLGHAHGE
DTPRLNLVFR ATSEVIAPVS AGIVIIALVF LPLLSLQGLE GKLFAPVALT IVFALLGSLL
LALTLVPVLA SFGLRSGHHG DPWIMRQLGP RYRALLDGAF ARKRLVYGLS AAGLVLAGLA
YGAVGKTFMP TMDEGSVIVQ LTKLPSINLS QSVAGDMAVQ RALLTVPEVE DVIARVGSDE
IGLDPMGLNE TDSFVQLKPR SEWRGNKDFV VEEIRKALEG LPGIEASFTQ PIEMRVSEML
TGARGDLAVK IFGPDSQMLA DLAGQVQHTL SGIQGASEVL TVANDSVDYL QLDIDRAATG
RFGMPVDQMQ DALRAQVEGV HAGIVADGQK RVPIVIRGDD SIRNDPARFA DLQLRTPDGT
LARVSDMARV ERTQGPVKLD HENGSRFALV QAFVSGRDLV GYVDEAKAAV AARVRLPAGY
SIVWGGQFEN QQRASARLML VIPIALALIF LVQLATLRSL RASLLILANI PFAMVGGLLS
LWLSGEYLSV PASVGFIALL GIAVLNGLVL VAYFRQLRAE GLSMAETVRL GAQRRLRPVL
MTASITAFGL VPLLFASGPG SEIQRPLAIV VIGGLITSTL LTLILLPILF ERFGESVEEI
ANV
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