| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3706 |
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| Symbol | |
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| ID | 5196305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4067808 |
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| End bp | 4069592 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640583262 |
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| Product | ABC transporter related |
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| Protein accession | YP_001264190 |
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| Protein GI | 148556608 |
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| COG category | [G] Carbohydrate transport and metabolism
[V] Defense mechanisms |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component
[COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCCG GTAGCGCAGC ATCGGACCCG CCACCTGCCC CGCTCGATGA GGTCGCGGTC
GTCATCGATG GGGTGAGCAA GCATTTCGGC GGCGTGCAGG CATTGCAGGA TCTGAACGCA
CAGATCCGGT TTGGCCGCCT GACCGGGCTG GTTGGACCGG ACGGTGCGGG CAAGACAACC
CTGATGCGTA TCCTGACGGG TCTGCTGGCG CCGAATAGCG GCCGCGCCAC GGTGGCGGGC
TTTGATGTGG TGGACGACAA TGACGCCATC CATGCCGCAA CCGGTTACAT GCCGCAGCGC
TTTGGTCTCT ACGAAGACTT GTCGGTCATG GAGAATATGC GGCTCTATGC GCAGTTGCGC
GGCATGGATG CCGACCGAAA CGGCGAGTTG TTTTCCGAAT TGCTCGACTT CACGCGTCTT
GCCCCCTTTA CCGGGCGTCT GGCGGGCAAG CTGTCCGGCG GCATGAAACA GAAACTCGGC
CTGGCCTGCG CCTTGATGGC GCGGCCTGCC GTCCTGCTTC TGGATGAGCC AAGTGTCGGC
GTCGATCCCG TCAGCCGTCA GGATCTGTGG CGCATGGTAC AGGCGCTGAC CGACGAGGGC
ATGGCCGTGG TCTGGTCGAC CGCCTATCTC GACGAGGCCG AGCGTTGCGA CAGCGTGCTG
CTGCTCAACG AAGGGCGGCT TGCCTATGAC GGGTCGCCCG GAGAACTGAC CGGGCGCCTT
GCCGGCCGCA GCTTTCGTCT GGAACAAGTT GGCGATGAAC GTCGGACCGT GCTGGCCGAG
GCGCTGGACC TGAGCAGCGT GGGCGATGGC GTGGTTCAGG GCGCCGGTGT TCGCATCGTG
TTGCGCCCCG GCGCGGGAAC GGGCCAGATA ACCGCTCTTG CCGATCGGAT CGCGGCGCAG
CTAAGGGCGG TGCCCGCCCG TTTCGAGGAC GCTTTTATCG ATCTGCTTGG CGGCGGCCCG
GGCGGTACAT CGGCTCTCGC CGAGGGGCTC CCGCCTGTCC AGCTTGAGTC GGACATCGCC
GTTTCCTGCC GGGACCTGAC CAAGCGCTTC GGCGATTTCA CGGCCACCGA CAATGTCAGC
TTCGAGGTGC GCAAGGGCGA AATCTTCGGT CTGCTCGGTC CGAACGGTGC TGGCAAATCA
ACCACCTTCA AGATGCTGTG CGGCCTACTC AAACCTACCA GCGGTGAGGC GCATGTGGTG
GGGCTTGATC TGCGCCGCGC GACCGGCGCG GTCAAAGGTC AGCTTGGCTA TATGGCGCAG
AAGTTCTCGC TCTATGGCTT GCTGTCCGTG CGACAGAATC TGGAGTTCTC CGCTGGCGTC
TATGGTCTGG ACGGCGCGAC GCAGCGGGCG CGGATCGAGG AAATGATCGA AATCTTCGGC
TTGCAGCCCT GGCTGTCGTC AGCGCCGGAC TCTCTGCCGC TCGGATACAA GCAGCGCCTG
GCGCTGGCCT GCGCGGTGAT GCATCGCCCG CCGGTGCTGT TTCTGGATGA GCCGACTTCG
GGCGTCGATC CGATTACGCG GCGGGAGTTC TGGACCCACA TCAACGGCCT TGCCCGCAAG
GGCGTGACTG TGATGGTCAC CACCCATTTC ATGGACGAGG CGGAATATTG CGACCGGGTA
GCGATGCTCT ATCGCGCCCG GCTGATCGCG CTGGACACGC CGGACGCTCT CAAACGCGGT
GCCGCCAGCG ATGCCCGGCC GGACCCGACC ATGGAAGACG CGTTCATTCA TCTGGTCGAA
GCCGAAGATC TCGCCGATGT CGCCCGTAGC GAGGTCGCCG CATGA
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| Protein sequence | MASGSAASDP PPAPLDEVAV VIDGVSKHFG GVQALQDLNA QIRFGRLTGL VGPDGAGKTT
LMRILTGLLA PNSGRATVAG FDVVDDNDAI HAATGYMPQR FGLYEDLSVM ENMRLYAQLR
GMDADRNGEL FSELLDFTRL APFTGRLAGK LSGGMKQKLG LACALMARPA VLLLDEPSVG
VDPVSRQDLW RMVQALTDEG MAVVWSTAYL DEAERCDSVL LLNEGRLAYD GSPGELTGRL
AGRSFRLEQV GDERRTVLAE ALDLSSVGDG VVQGAGVRIV LRPGAGTGQI TALADRIAAQ
LRAVPARFED AFIDLLGGGP GGTSALAEGL PPVQLESDIA VSCRDLTKRF GDFTATDNVS
FEVRKGEIFG LLGPNGAGKS TTFKMLCGLL KPTSGEAHVV GLDLRRATGA VKGQLGYMAQ
KFSLYGLLSV RQNLEFSAGV YGLDGATQRA RIEEMIEIFG LQPWLSSAPD SLPLGYKQRL
ALACAVMHRP PVLFLDEPTS GVDPITRREF WTHINGLARK GVTVMVTTHF MDEAEYCDRV
AMLYRARLIA LDTPDALKRG AASDARPDPT MEDAFIHLVE AEDLADVARS EVAA
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