| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3698 |
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| Symbol | |
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| ID | 5197361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4061447 |
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| End bp | 4062130 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583254 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001264182 |
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| Protein GI | 148556600 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGAC GCCCCACCAT CCGCTATGGC CAGACCCCCG AACCCACGAC ACCCTATCAG
CGCGCAGCCC AGCAATGGGA CGATCGCATC GGCTCCGCGC GCGTGCAGGC GAAGAACTGG
CGCCTCGCCT TCTTCGGCGC ACTGGCGCTC TCGGGCGGCC TTTCCGCCGG TCTCGTCTGG
CAATCGGCGC GTGGGCATAT CGTGCCCTGG GTGGTGCAGG TCGATCGGCT CGGCGAGGCG
CAGGCGGTCG CGCCCGCCGA GGCCGGCTAT CGCCCCACCG ATCCGCAGAT CGCGTTCCAC
CTCGCCCGCT TCATCGAGCA GGTCAGGGCG ATCCCGGCCG ATCCGGTGAT CGTCCGCCAG
AACTGGCTGC GCGCCTACGA CTTCACGACC GATCGGGGCG CGGTGGCGCT CAACGACTAC
GCCCGCGCCA ACGACCCCTT CGCCAATGTC GGCCGGGTGC AGGTCGCGGT GGACGTGTCG
AGCGTGATCC GGGCCTCGCC CGACAGCTTC CGCGTCGCCT GGACCGAGCG CCGCTATCAG
GACGGGAGCC TCGCCGCGAC CGAACGCTGG TCGGCCATCC TCACCATCGT CGTGCAGCCG
CCGCGCACGC CCGACGCCCT GCGCAAGAAC CCGCTCGGCG TCTTCGTCAA CGCTTTGAAT
TGGTCAAGGG AGCTGTCGCA ATGA
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| Protein sequence | MFRRPTIRYG QTPEPTTPYQ RAAQQWDDRI GSARVQAKNW RLAFFGALAL SGGLSAGLVW
QSARGHIVPW VVQVDRLGEA QAVAPAEAGY RPTDPQIAFH LARFIEQVRA IPADPVIVRQ
NWLRAYDFTT DRGAVALNDY ARANDPFANV GRVQVAVDVS SVIRASPDSF RVAWTERRYQ
DGSLAATERW SAILTIVVQP PRTPDALRKN PLGVFVNALN WSRELSQ
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