Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3678 |
Symbol | |
ID | 5200546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4043667 |
End bp | 4044512 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640583234 |
Product | hypothetical protein |
Protein accession | YP_001264162 |
Protein GI | 148556580 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCATCC ATCACCTTGC TACCCGGTTC GGCCGCAACA GCCATCAGAT CGGCGGCTAT GAGGCGCTCG ACAACGAGGC GCTGTATCGT AACGTCCCGT CCATCTTCGC CCGCGAGGCG CACGACAGCC GTTCGGAACG CTATGTCTAT GTCCCCACCA TCGACATTGT GGAAGGGTTG CGCCGGGAAG GATGGTTCCC GTTCTTCGCT GTGCAGTCCG TCCCCCGCGA CGGCAGCCGC CACGGCCACG CCAAGCACAT GCTGCGCCTG CGCCGGGACG ACGGTATCGG CAAGCCCGAG GCCGCCGAGG TCATCATCGT GAACAGCCAT GATGGGACCA GCGCCTATCA GATGTTTGCC GGGATGCTGC GGTTCGTCTG CACCAATTCC ATGATCGCGG GCGAGCGGTT CGAGGAGGTC CGCGTGCCCC ATAAGGGCAA TATCCAGCAC GACATCATCG AAGGCGTTTA CACCGTGGCC GAGGACTTCC CCCGGCTGAT CGACGCCAGC GAGACGATGA AAGAGGTTCG GCTTTCCGAG GATGAGCAGC GCTTGCTCGG CGAGGTCAGC CTTGTCGCCC GCTATGGCGA CGACGAGAGC CCGCTCACCC CCGAGCAGAT CATCGAGCCG CGCCGCTACG AGGATCGGGG CGATAGCCTG TGGACCACGT TCAACGTCAT TCAGGAGAAC GTCATTCGGG GCGGATTGCA TGGCCGCAAG CGCAATGCCG AGGGCCGTAT CCGCCGCAGC CGTTCGCGTC CGATCAACGG CATCGACCAG AACGTGACGC TCAATCGCGC GCTCTGGACG CTGGCCGAAG GGATGCAGCG CCTCAAGACG GGTTAA
|
Protein sequence | MSIHHLATRF GRNSHQIGGY EALDNEALYR NVPSIFAREA HDSRSERYVY VPTIDIVEGL RREGWFPFFA VQSVPRDGSR HGHAKHMLRL RRDDGIGKPE AAEVIIVNSH DGTSAYQMFA GMLRFVCTNS MIAGERFEEV RVPHKGNIQH DIIEGVYTVA EDFPRLIDAS ETMKEVRLSE DEQRLLGEVS LVARYGDDES PLTPEQIIEP RRYEDRGDSL WTTFNVIQEN VIRGGLHGRK RNAEGRIRRS RSRPINGIDQ NVTLNRALWT LAEGMQRLKT G
|
| |