Gene Swit_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3678 
Symbol 
ID5200546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4043667 
End bp4044512 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content63% 
IMG OID640583234 
Producthypothetical protein 
Protein accessionYP_001264162 
Protein GI148556580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC ATCACCTTGC TACCCGGTTC GGCCGCAACA GCCATCAGAT CGGCGGCTAT 
GAGGCGCTCG ACAACGAGGC GCTGTATCGT AACGTCCCGT CCATCTTCGC CCGCGAGGCG
CACGACAGCC GTTCGGAACG CTATGTCTAT GTCCCCACCA TCGACATTGT GGAAGGGTTG
CGCCGGGAAG GATGGTTCCC GTTCTTCGCT GTGCAGTCCG TCCCCCGCGA CGGCAGCCGC
CACGGCCACG CCAAGCACAT GCTGCGCCTG CGCCGGGACG ACGGTATCGG CAAGCCCGAG
GCCGCCGAGG TCATCATCGT GAACAGCCAT GATGGGACCA GCGCCTATCA GATGTTTGCC
GGGATGCTGC GGTTCGTCTG CACCAATTCC ATGATCGCGG GCGAGCGGTT CGAGGAGGTC
CGCGTGCCCC ATAAGGGCAA TATCCAGCAC GACATCATCG AAGGCGTTTA CACCGTGGCC
GAGGACTTCC CCCGGCTGAT CGACGCCAGC GAGACGATGA AAGAGGTTCG GCTTTCCGAG
GATGAGCAGC GCTTGCTCGG CGAGGTCAGC CTTGTCGCCC GCTATGGCGA CGACGAGAGC
CCGCTCACCC CCGAGCAGAT CATCGAGCCG CGCCGCTACG AGGATCGGGG CGATAGCCTG
TGGACCACGT TCAACGTCAT TCAGGAGAAC GTCATTCGGG GCGGATTGCA TGGCCGCAAG
CGCAATGCCG AGGGCCGTAT CCGCCGCAGC CGTTCGCGTC CGATCAACGG CATCGACCAG
AACGTGACGC TCAATCGCGC GCTCTGGACG CTGGCCGAAG GGATGCAGCG CCTCAAGACG
GGTTAA
 
Protein sequence
MSIHHLATRF GRNSHQIGGY EALDNEALYR NVPSIFAREA HDSRSERYVY VPTIDIVEGL 
RREGWFPFFA VQSVPRDGSR HGHAKHMLRL RRDDGIGKPE AAEVIIVNSH DGTSAYQMFA
GMLRFVCTNS MIAGERFEEV RVPHKGNIQH DIIEGVYTVA EDFPRLIDAS ETMKEVRLSE
DEQRLLGEVS LVARYGDDES PLTPEQIIEP RRYEDRGDSL WTTFNVIQEN VIRGGLHGRK
RNAEGRIRRS RSRPINGIDQ NVTLNRALWT LAEGMQRLKT G