Gene Swit_3673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3673 
Symbol 
ID5200762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4039940 
End bp4040647 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID640583229 
Producthypothetical protein 
Protein accessionYP_001264157 
Protein GI148556575 
COG category 
COG ID 
TIGRFAM ID[TIGR02391] conserved hypothetical protein TIGR02391 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGCGG CTTGCGAGAT GACCGATCCC GGCGAGATAA CGAAGCGGCA CCGCATCTAT 
AACGCCTTCG TCACCAGCCA GAACGCCCGA CAGGATCGCA CCCGCATCCT CGGTTTTATC
CGCAAAGCAA TGAGCCCGGC CCGCTATAGT CGTGAGCCAT ATCGTTACGA ACCGATGCGG
GCGAATCTCA ACCAGGCGCC TGCCTTTGCC GGGCTCGTGG TCAGTGAGGC CGGAAAGATC
GAAACCGTTG AACAGGCGAC GACGCTGCCA GAGGCGCAGC GCCGAGCGAG GGAATTGCGC
ACCGATCTGG AAACGCGCGG CGTCCATCCC GACGTGCTGC GCTTCTGCCG TGCGGAACTG
TTGGCCGACG ATTATTTCCA CGCGGTCCAA GAAGCGGTGA AAAGCGTCGC CGACAAGATG
CGGGTGCGGA CGGGCCTGAC CGATGATGGC GGAACGCTGG TGGACCGCGT GTTAGGCGGC
GAGCCGCCGA TGCTGGCGAT CAATCCGCGC AACACGGCGA GCGAGCGCAG CGAGCAAAGC
GGCTTCGCCA ACCTGGTCAA AGGCGTGTTC GGGATGTTCC GCAATCCGAC CGCTCATGAG
GCGCGCATCC ACTGGCCGAT GACCAAGACC GATGCCGAGG ATCTCCTGAC GCTCGTATCG
TTGATCCATC GTCGGCTCGA TGCCGCCCAC ATGCCCCCGC GTCCCTGA
 
Protein sequence
MIAACEMTDP GEITKRHRIY NAFVTSQNAR QDRTRILGFI RKAMSPARYS REPYRYEPMR 
ANLNQAPAFA GLVVSEAGKI ETVEQATTLP EAQRRARELR TDLETRGVHP DVLRFCRAEL
LADDYFHAVQ EAVKSVADKM RVRTGLTDDG GTLVDRVLGG EPPMLAINPR NTASERSEQS
GFANLVKGVF GMFRNPTAHE ARIHWPMTKT DAEDLLTLVS LIHRRLDAAH MPPRP