Gene Swit_3671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3671 
Symbol 
ID5200760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4035844 
End bp4036836 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content63% 
IMG OID640583227 
ProductATPase central domain-containing protein 
Protein accessionYP_001264155 
Protein GI148556573 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACCA AGCAGATCGT CGCGCTGCTC AATTCGCACG TTGCTGGGGA CGAAGAGCAA 
TTTCTGTCGA TAGCGCTCCA GGTTGCGGCA CAGCAAGCGC GCCAAGGCAA TGCCGAAGAG
GCGAACCAGT TGAAGCGCCT CGTCCAAAAG GCGCGCGAAC GGCTTGGCAA CGCGCCTACC
GGCCAAGCGC CAATCCCTCT GGCGCGGCCG CGCGGCGAGT TGCAAGGGCT GGTCGAGAGC
AGCTATCCGA AGACCAAGCT CGACAACATG GTGCTTGGCG AGGCCATTCG CTCGCGGTTG
CAGCGCGTTG TCCGGCAGCA AAGCGAGCGG GCGACCTTGC GCGATCATGG GCAGGTTCCG
GCGACGCACC TGCTGCTTGT CGGGCCTCCG GGCACGGGCA AGACCATGAC GGCCTCGGCA
CTCGCGGGAG AGCTGCGCTT GCCGCTGTTC ACGGCACGGC TGGACTCGTT GTTCAGCCGC
TTCTTTGGGG AGACGGCCGG CAAGCTGCGC TTGCTGTTTG ATCAGATTGC GCAGACCCGC
GGCGTCTATT TGCTCGACGA GTTCGACGCG ATCGGTTCGC GTCGTGGCGA TCCCAATGAC
GTCGGCGAGA TTCGACGGGT TCTTAACTCG GTGCTCTCCT TCATGGAGGA GCCTAACTCA
ACCGACAGTA TCGTCATCGC GGCGACCAAC CATGTCGAGA TACTCGACAA GGCGCTGGCA
CGCAGGTTTG ATGAAGTCAT CGAATATCGG CTGCCCGATC CCGAGTCCGC GCGCGCGATC
CTCTCACGCC GGCTGGGACG CTACCGCCTG ACCGCCAAGG CTTGGGCGTC GATCGCTCCC
ATCACGGAAG GCTTGAGCCA GGGGGAGCTG GTGCGCGCGG CCGATGCCGT CGTGAAGGAC
GCTATCCTCG AAGGGGCGAA GTCGATCTCG GCCGACCATT TGCGCATCGC GCTCCAAGAC
CGCCAAATCT TTCGACAGAG CTTTGGACAT TGA
 
Protein sequence
MSTKQIVALL NSHVAGDEEQ FLSIALQVAA QQARQGNAEE ANQLKRLVQK ARERLGNAPT 
GQAPIPLARP RGELQGLVES SYPKTKLDNM VLGEAIRSRL QRVVRQQSER ATLRDHGQVP
ATHLLLVGPP GTGKTMTASA LAGELRLPLF TARLDSLFSR FFGETAGKLR LLFDQIAQTR
GVYLLDEFDA IGSRRGDPND VGEIRRVLNS VLSFMEEPNS TDSIVIAATN HVEILDKALA
RRFDEVIEYR LPDPESARAI LSRRLGRYRL TAKAWASIAP ITEGLSQGEL VRAADAVVKD
AILEGAKSIS ADHLRIALQD RQIFRQSFGH