Gene Swit_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3652 
Symbol 
ID5196999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4012991 
End bp4013401 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content71% 
IMG OID640583207 
Producthypothetical protein 
Protein accessionYP_001264136 
Protein GI148556554 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.92305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA AGCCTGTTCC CGTGCCCGAC AAGGATTCGG CCCCCTATTG GGAAGGGCTG 
GCGGCGGGCG AGCTCAGGGT GCAGCGCTGC TCGGGCTGCG GCACGCTGCG CTGGCCGGCG
CGGGCGATCT GCAACCGCTG CCGCAGCTTC GACGCCGACT GGGTGGCGAT GAGCGGGCGC
GGCACGATCA AGAGCTGGAT CCGCACGCAT CAGCGCTTCC ACCCGGCCTT CGCCGACGAG
CTTCCCTATG TGACGCTGCT CGTCGCGCTC GCCGAGCAGG CGGACATCCA GATCATCGGC
GCCTTCGCCG ATCCGGCGGC CGAACCCAGG ACGGGGGCGG CGGTGCGCGC GGTGTTCAGG
AACGGCCAGG ACGGTGGGCC GATCCTGTTC TGGGAGCCCG ATGCTCCCTG A
 
Protein sequence
MIAKPVPVPD KDSAPYWEGL AAGELRVQRC SGCGTLRWPA RAICNRCRSF DADWVAMSGR 
GTIKSWIRTH QRFHPAFADE LPYVTLLVAL AEQADIQIIG AFADPAAEPR TGAAVRAVFR
NGQDGGPILF WEPDAP