Gene Swit_3651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3651 
Symbol 
ID5196998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4011831 
End bp4012994 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID640583206 
ProductAcetyl-CoA acetyltransferase-like protein 
Protein accessionYP_001264135 
Protein GI148556553 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.48348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCTG GCCTGTCGGG AAAGGCGGCG ATAGCCGGGA TCGGCTATAC CGAATTCTCG 
CGTAATTCCG GTGTCAGCAC ATTGACGCTC GCGCTGCGCG CCATCATGGC CGCGCTCGAC
GATGCGGGTC TCGATCCGGA CAAGGTGGAC GGTATCGCCA CCCACCGCGT CGGTGACTCG
ATCCCGGCTC CAATGGTCGC GACGACGCTC GGATTGACCG ACCCTCATTA TTATGTCGAC
CATTTCGGCG GCGGCGGCAG CTCGCACGGA CTGGTCGGGC AGGCGGCGCT CGCGGTCGCC
AGCGGCGTCG CCGACCATGT CGTCTGCTAC CGGGCGATCA ATGCCCGTTC CGAATTCCGC
ATGGGCGGCA CCGGCCGCCC GCTGGTCGAC CATATCGAGA CCCAGTATCA GGCGGCCTAC
GGCTATATGG CCCCGCCGCA ATATTATGCG ATGATGGCGC GGGCCTATAT GGATGCCTTC
GGGATCGACG AGCGCCACCT CGGCGCGGTC GCGATCTCGC AGCGCGCCAA CGCCGCGCAC
AATCCGCGCG CGATGATGCG CGATCCGATC AGCTTCGACG ACTATCGCGC GTCGCGGATG
ATCGCCGAGC CGTTCCGCCT GCTCGACTGC TGCCTGGAGA CCGATGTCGG CGTCGCCCTG
CTCGTCACCA CGCCAGAACG GGCGCGCGAC CTGCGCAAGC CGGCGGTGAT CGTCGACGCG
GCGGCCTGGG GCGGCGGCAC GACCCTGCAG AGCGCCGGCG CGCCCGACAT CACCACCTCC
TATGCCGCGC GGATGGCGCC GCGCCTGTTC GACATGGCGG GGATCGGCCC GGCCGATGTC
GACTTCGCCA ATTTCTACGA CTGCTTCACC TTCTCGGTGC TGATGCAGCT CGAGGATTAC
GGCTTCTGCG GCAAGGGCGA GGCGGGCGGC TTCGTCCTCG ACGGGCAGCA CCGGATGGAC
GGGCGACTGC CGGTCAATCC GCATGGCGGC TTCCTGTCCG AAGGCTATGC GCACGGCATG
AACCATATCG CCGAGGCGGT GCAGCAACTG CGCGGCGAAG CGGGCGGCCG CCAGGTCCGC
GACGCCCGGA TCGGCCTCAG CACCGGCGCC CCCGGCTATG TCGGCGGCGT CACCAGCGCG
CTCCTGCTCC GGAGGGACGG ATGA
 
Protein sequence
MASGLSGKAA IAGIGYTEFS RNSGVSTLTL ALRAIMAALD DAGLDPDKVD GIATHRVGDS 
IPAPMVATTL GLTDPHYYVD HFGGGGSSHG LVGQAALAVA SGVADHVVCY RAINARSEFR
MGGTGRPLVD HIETQYQAAY GYMAPPQYYA MMARAYMDAF GIDERHLGAV AISQRANAAH
NPRAMMRDPI SFDDYRASRM IAEPFRLLDC CLETDVGVAL LVTTPERARD LRKPAVIVDA
AAWGGGTTLQ SAGAPDITTS YAARMAPRLF DMAGIGPADV DFANFYDCFT FSVLMQLEDY
GFCGKGEAGG FVLDGQHRMD GRLPVNPHGG FLSEGYAHGM NHIAEAVQQL RGEAGGRQVR
DARIGLSTGA PGYVGGVTSA LLLRRDG