| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3649 |
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| Symbol | |
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| ID | 5196871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4008086 |
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| End bp | 4010251 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583204 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001264133 |
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| Protein GI | 148556551 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.495656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.769943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC GGCGCATCTT CATCGGCGTC GATATCGGCG GCACCTTCAC CGATCTGGTG
CTGGCCGACA ATCGCGGCGC GATCCACAAC ATCAAGACGC TGACGACGGC CGACGATCCG
GTGCGCGGGG TGATGACCGC CGTCGCCCAG GGCCTCGACG AGGCGGGCGC GGCGCCGGGC
GAGGTGACGC GCTTCGTCCA TGCGACGACG CTGCCGACCA ACCTCGTCCT CGAACGCAAG
GGCGCGAAGC TGGGGCTGAT CGCGACCGCC GGGTTCGGCG ACCTGTTCCA CATCGGCAAG
CAGCATGCGA TCGGGCCCGA CCGCTTCAAC CTGTCCTACA CGCCGCCGGC GCCGCTGCTG
CCGCGATCGA TGGTCGCCGA GGTGCGCGAG CGGGTGAATG CGGCCGGCGC GGTGCTGCGC
CCGATCGACC ACGCCGATAT CGAGCGCGCG GTGCGCGGAC TGGTCGAGCG CGGCGCGGAG
GCGATCGCGG TCTGCCTGCT CAACAGCTAC GCCAATCCCG CGCACGAGGC GGTGGTCGGC
GAGGTCGCCC GCGCGGTCGC GCCCGGCGCC TATGTCTGCC TGTCGTCGGA GGTATGGCCC
GAATTCCAGG AATATGAGCG GGCCGCGACG ACGCTGATCT CGGCCTATAT CGGCCCGACC
CTCGCCAATT ATGTCGGCCG GCTGGAGGAT GCGCTGCGCG GCATCGGCAT CGATGCGGAG
CTGCAGATCA TGCAGTCGAG CGGGGCGGTG ATGGGCGCGG CGATGGCGGC GCGCAAGGCC
GCCTATGCGA TCGAATCCGG CCCGGCCGCC GGCGTCATGG CCGCCGCCCA TCTGGCGCGC
GAGGCGGGGC GCCCGGGCCT CGTCTCCTTC GACATGGGCG GGACGACCGC CAAGGCCGGC
CTCGTCGTCG ACGGCGAGCC GCGCATCACC CACCAGTTCC GCGCCGGCGG CGGCACCAGC
GCGGCGGGCC GCGCCGATGC GGGCGAGCCG ATCAAGGTGC CGGTGATCGA CCTAGCCGAG
GTCGGCGCCG GCGGCGGCAG CATCGCCCGG GTCGACACCG GCGGCTTCCT GCGCGTCGGG
CCGCACAGCG CCTCCTCTTA TCCGGGGCCG GCCTGCTACG GGCTCGGCGG CACGCAGCCG
ACCGTCACCG ACGCCAATGT CGTGCTCGGC TACATCAACC CCGGCTATTT CGCGGGCGGC
AGCATGACGC TCGACGCCGA GGCGAGCCGC CGCGCGATCG AGGAGCATGT CGCCTGGCCG
CTGGGGATCG ACGTGGTCGC GGCGGCGCGC GGCATCCATG CCCTCGCCAA CACCGCGATG
GCGGCGGCGA TCCGGGTCGT GACCCTCCAG CGCGGCATCG ACCCGCGCGA CCATGCGCTG
GTCGCCTCGG GCGGCGCCGG GCCGATCCAC GCGGTCAAGC TCGCCGAGCT GTTCGGGATC
GAGACGGTGA TCATCCCGCC GTCGCCGGGG GTGCGATCGG CCTGGGGCCT GCTGATCTCC
GACCTCGCCC ATGATTTCGT CGCGACCGCG ATCATGCGCG CGGCCGAGGC CGATCCGGCG
CGGATCGCTA CGATCCTGGC TGGGCTGGAG GAGAAGGGCC GGCAGGCGCT GGCCCGCGCC
GCCTCGGCCG AGACGCGGAT CGTCGTCCAG CGCAGCATCG ATATCCGGCT GGCCCACCAG
CATCAGGAGA TCACCGTGCC GCTCGGCGAC GGGCCGGTCG ACGCCGCGCT GCTGGAACGG
GCCGAGGGCG ATTTCCGCAC CATCTATGCC CGCACCTTCG GCATCCGGCC GAAGGAGGCG
TGCCAGTTCG TCAATTTCCG GCTGCGCATC TCGGCGGTGG TCGAGAAGCC CGCGCCGCTC
GGCCGCGCCT GGGGCGACGG CGTCGCCGAC CGCGCGCGCA AGGGCGTCCG CCAGGCCTGG
TTCGACGGCC GCGCGCTCGC GACCCCGGTC TACGACCGCG CCCGGCTCGA ACCCGGCGAC
CGGATCATGG GGCCGGCGAT CGTCGAGGAA CCCGATTCCT CGACGATCTG CCCCGACGGC
TATGCCGCCA CCGTCGACCT GCACGGCAAC CTGCTGATCT CGCCGGTCAG CGCCGACGAG
CGCGCGGGCC CTGAGGACGG CGACGCGGCG CCGGTCGCGC GGACCCTGCA CGACGCGCTG
TGCTGA
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| Protein sequence | MSARRIFIGV DIGGTFTDLV LADNRGAIHN IKTLTTADDP VRGVMTAVAQ GLDEAGAAPG
EVTRFVHATT LPTNLVLERK GAKLGLIATA GFGDLFHIGK QHAIGPDRFN LSYTPPAPLL
PRSMVAEVRE RVNAAGAVLR PIDHADIERA VRGLVERGAE AIAVCLLNSY ANPAHEAVVG
EVARAVAPGA YVCLSSEVWP EFQEYERAAT TLISAYIGPT LANYVGRLED ALRGIGIDAE
LQIMQSSGAV MGAAMAARKA AYAIESGPAA GVMAAAHLAR EAGRPGLVSF DMGGTTAKAG
LVVDGEPRIT HQFRAGGGTS AAGRADAGEP IKVPVIDLAE VGAGGGSIAR VDTGGFLRVG
PHSASSYPGP ACYGLGGTQP TVTDANVVLG YINPGYFAGG SMTLDAEASR RAIEEHVAWP
LGIDVVAAAR GIHALANTAM AAAIRVVTLQ RGIDPRDHAL VASGGAGPIH AVKLAELFGI
ETVIIPPSPG VRSAWGLLIS DLAHDFVATA IMRAAEADPA RIATILAGLE EKGRQALARA
ASAETRIVVQ RSIDIRLAHQ HQEITVPLGD GPVDAALLER AEGDFRTIYA RTFGIRPKEA
CQFVNFRLRI SAVVEKPAPL GRAWGDGVAD RARKGVRQAW FDGRALATPV YDRARLEPGD
RIMGPAIVEE PDSSTICPDG YAATVDLHGN LLISPVSADE RAGPEDGDAA PVARTLHDAL
C
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