| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3648 |
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| Symbol | |
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| ID | 5196870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4006395 |
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| End bp | 4008089 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583203 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001264132 |
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| Protein GI | 148556550 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.101613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGATC GCACCGACGA TCCGGTCCTC GTCGAAGTCG TCCGCAACGC GCTCGCCATG
GTCGCCGAGG AGGCGGGCAT CGCCGCCGCG CGCAGCGCCA GCTCGCCCTT CGTCAGCCAG
GCCTCGGCGA TCGCCTGCGC GATCTTCGAT GCCGAGGGCC GGCTGGTGGT GCAGACGGCG
GGGGGCATGC TCCACGTCTC GGCGCTGCAG GTGATGCTGC CCGAGATCTG GAAGAGCCAT
CCGCCCGAGA GCCTGCGCGA GGGCGACGCG ATCATCCTCA ACGATCCGTT CCGGGGCGGC
ATCCACCCGA CCGACGTCGG CGCCTTCCGG CCGATCTTCC ACGACGGGAA GCCGGTCTTC
TACTGCGGCG CGATGATGAT CGTGTCGGAC CTAGGCGGCC TGTCGGCCGG CGGGCTCCCC
GCCAACGCGA CCGAGACCTT CCACGAGGGC ATCGTCCTGC CGCCGCTCAA ATTCTTCGCG
CAGGGCGCGC GGGTGGCCGA GGTGGAGACG CTGCTCCAGG CCAACAGCCG CACGCCGCAG
CGCATCGTCG GCGACATCGA GGCGCTGGTG ATCGGCGGCA ACATCGCGGC GGCGCGGATG
GCGGTGCTGA TCGAGCGCTA CGGCATGGCC CGGCTCGGCG CGATCATCGA CGACCTGTTC
GACCATGCCG AGCGGATGAC CCGCCACGGC ATCGCGGCGA TTCCCGACGG CACCTATCGC
GGCGCCTATG CGATCGAAGA GGACGGCGTC GAGACGGGGC GCGATTTCCG GGTCGAGGTG
ACGGTCACGG TCGACGGCGA CCGCTGCCGC TTCGATTTCA CCGGCACCTC GCCGCAGGCG
CGCGGGGCGA TCAACTCCTC CTATTCGCAG TCGCTGTCGG GCGCGGTGTT CGCGCTGCGC
TGCTATCTCG ATCCGGAGAT TCCGCTCAAC GAGGGTTTCT ACCGCTGCCT CGACATCGAG
CTGCCGGTCG GCACGCTGGT CAATCCGCGC CATCCGGCGG CGTGCAACCT GCGCATGGCG
ACGGTGCAGG CGATGATCGA TGCGATCAGC CGGGCGCTGT CGGGCGCCTA TCCCGACCAT
GCCGCCGCCG CCGCCGGGCT GGTCTCGACC GTCACCGCGC ACGGCAAGCA GCTCGACGGC
GCGACGAGCT GGAGCTTCCT CGACGTCTTC TTCGGCATCG GCGGGGCCCG GGCGGGCGCG
GACGGGGCGG ACGGATCGCC GTTCATCATC TACGGCGCGT CCAACTATGA CCGGAACATC
GAGTCCTACG AGCTCGAATT CCCGATGGTC TACCAGGAAT ATCGGCTGTT GCAGGACTCG
GGCGGCCCCG GCCGCTGGCG CGGCGGCTGC GGGCTGGTCA AGACCGTCAC CTTCGAGGTC
GACGCCGAGA TCACGGTGCG CGGCACCGAC CGCTATATCG TGCCGCCGCA GGGCGCCGAC
GGCGGCATGG CGGGCCAGCC GGGCGCCTGG GTGCTCAACC GGGGGCGGGC CGACGAAGCG
CATCTGCCGC CCAAGAAGAC CAACCATCGC ATCCGCGCCG GCGACACGCT GACCATGGTC
GTCGCGGGCG GCGGCGGCCT CGGCGATCCG CGGGAGCGCG ATCGCGATCT CGTCCGCAGC
GACGTCGAGG AGGGCTATGT CTCGCCCCGT TCGGCCCGCG ACGATTATGG ACTCGACATT
GAGGTGACGG CATGA
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| Protein sequence | MVDRTDDPVL VEVVRNALAM VAEEAGIAAA RSASSPFVSQ ASAIACAIFD AEGRLVVQTA
GGMLHVSALQ VMLPEIWKSH PPESLREGDA IILNDPFRGG IHPTDVGAFR PIFHDGKPVF
YCGAMMIVSD LGGLSAGGLP ANATETFHEG IVLPPLKFFA QGARVAEVET LLQANSRTPQ
RIVGDIEALV IGGNIAAARM AVLIERYGMA RLGAIIDDLF DHAERMTRHG IAAIPDGTYR
GAYAIEEDGV ETGRDFRVEV TVTVDGDRCR FDFTGTSPQA RGAINSSYSQ SLSGAVFALR
CYLDPEIPLN EGFYRCLDIE LPVGTLVNPR HPAACNLRMA TVQAMIDAIS RALSGAYPDH
AAAAAGLVST VTAHGKQLDG ATSWSFLDVF FGIGGARAGA DGADGSPFII YGASNYDRNI
ESYELEFPMV YQEYRLLQDS GGPGRWRGGC GLVKTVTFEV DAEITVRGTD RYIVPPQGAD
GGMAGQPGAW VLNRGRADEA HLPPKKTNHR IRAGDTLTMV VAGGGGLGDP RERDRDLVRS
DVEEGYVSPR SARDDYGLDI EVTA
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