Gene Swit_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3642 
Symbol 
ID5196231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4000554 
End bp4001738 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content69% 
IMG OID640583197 
Producthypothetical protein 
Protein accessionYP_001264126 
Protein GI148556544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.964783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.499897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CTGCCGTTCC GCTCGAATAT GACGCGCTCA TCGCCGCCGC GCGGCAGCGG 
TCGGGGCTGG AGGATTTCGG GCCCGACTGG ATCTTCACGC CCTTCCGCGT CTATCTCGAC
GCGATCGCGA AGGAGGCCGA GCTCAGCGAG ATCGGCCGCT TCATCCAGGG GGAAAGCATC
ATCAAGGGGC TCGTCGCGCG GCTGCGCCGC ACCGACGACA TCCGCCGCCA TCCGGAGATC
CTCGACGAGC AGGTGACGGT CGCCGCGACG ATCGTCAGCC TGCACCGGAC CGGCAGCACG
CTGATGCACC GCATGCTCGG CAGCGCGCCC TCGCTCACCG CGATGCACTG GTGGGAGACG
CAGTTCCCCG CGCCGCTGGA GGGCGAGGCG CGCGGCGATC CGGGCGGGCG GCGGGCGGCG
GCGCAGACCC TGCTCGACCA ATGGCTCGCG GCGATGCCTG AGCTGCTCTC GATCCACCCG
ATGTCGCTCG ACCAGCCCGA CGAGGAGGTG TCGCTCCAGG AACAGATGTT CATGGGGCTG
TCGCCCGAGT CCTTCCTCCA CATCCCGTCC TATGCGGCGT GGAGCGCGAC CGCCGATCAT
CGCCCGGTCT ATGAGGATTT GCGGCTGTGG CTCCAATATC TGCAATGGCA GGACCGGAGC
CGCGCCGGCC GCGCCTGGGT GCTCAAGACC CCGGCGCACC TGACCGCGCC CGAGCAGCTG
GCCGCGGTGT TCCCCGAGAC GGTGATCGTG ATGACGCATC GCGACCCGAT CAAGACGATC
CCGTCCTTCG CCAGCATGTC CTTCACCCTG CGGCGGATGC TGTCCGACCG CGCCGACAAG
GCGCGCACCG GCCGGCACTG GCTCGATCGG CTGAGCACGC TGATGAGCCG GCTGATGCGG
CTGCGTCCGT CGATCGGCGA GCATCGCTTC GTCGACATCG ACTATGAGGA GCTGGTCAAG
GACCCGATCG CCCAGGCCCG CCGCGTCTTC GCCGCGATGG GCCGCGAGCT GGGCGGCGAA
GACGAGGCGG CGATGCGCGC CTGGTTCGGC CGCAACCCGC GCGACGGGCG CCCGTCGCAT
CAATATGGGC TGGAGGAATA TGGCCTGACC GCCGAGGCGA TCGACGAGCG CTTCGCCGAC
TACAAGGCCC GCTTCCTCAA GCGGCGCGCG GTGGAGGCGG CATGA
 
Protein sequence
MTDAAVPLEY DALIAAARQR SGLEDFGPDW IFTPFRVYLD AIAKEAELSE IGRFIQGESI 
IKGLVARLRR TDDIRRHPEI LDEQVTVAAT IVSLHRTGST LMHRMLGSAP SLTAMHWWET
QFPAPLEGEA RGDPGGRRAA AQTLLDQWLA AMPELLSIHP MSLDQPDEEV SLQEQMFMGL
SPESFLHIPS YAAWSATADH RPVYEDLRLW LQYLQWQDRS RAGRAWVLKT PAHLTAPEQL
AAVFPETVIV MTHRDPIKTI PSFASMSFTL RRMLSDRADK ARTGRHWLDR LSTLMSRLMR
LRPSIGEHRF VDIDYEELVK DPIAQARRVF AAMGRELGGE DEAAMRAWFG RNPRDGRPSH
QYGLEEYGLT AEAIDERFAD YKARFLKRRA VEAA