Gene Swit_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3641 
Symbol 
ID5196230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3999431 
End bp4000549 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID640583196 
Producthypothetical protein 
Protein accessionYP_001264125 
Protein GI148556543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.817145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.492356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGC AACTTTCCCC CGAATCGCAT GAGGAACGGG TCTATAACGG ACGGGCCTGG 
GAGGATTTCT GCGACGGACT GAAGGCCGCC GGCCAGGTGA TCTTCCGCCC CGAGGCGCCC
GACACGATGC TCGACCGGGC CGAGGGCTGG CGCTGGCTGA CCCGGCTGAC CCGCGCCGCG
CTCGACATGG CGGTCGAATA TGGCGACCCG GCCTTTCCGG GCTTCTACCA GCTGTCGAAC
CACACGATCC GGATCGGCGC CGACAATCCC GACAACACCT ATTTCAACGC CACCATCACC
GCCGATCATG ACTACAGGAT CAGCGGCTAT CGCGGCACCG CGCCGATCCT GACCTTCGGG
TCGAAGGCGA ACCGCTACGC GATCGACGGG ACGATGGCGA CCACCGGCGA GATCGACCAG
CGCACCCTGA AGGTCGACGA GAACGGCTAT TTCGAGATCA TCGTCAGCCA GAAGGAGCAT
CCCGGCAACT GGCTGCGGCT GGAGCCGGAT TCGACGATGG TGATCGGGCG AGAGACCTTT
CTCGACCGCG CCACCGAGAA GCCCTGCGCG ATCAGGATCG AGCGGATCGG CCGGGTCGGC
GGCCCGCCGC CGCTGTCGGC CAAGCAGATC GACGAGGCGC TGCAGGAGAC CGCGCGCTGG
GTGCACGGCA CCGCCAAGAC CTTCGCCGAC TGGGCGCAGC TCTTCGCCAA GGACCCGAAC
GACCTGCCGC CGGTCCACCA GGCGATGTCG ATCAACGGCG GCGGCGACCC GACGATCCGC
TATTATCACG GCTATTGGGA GCTGAAGCCC GACGAGGCGC TGGTGATCGA GAGCGAGGTC
CCGGACTGCG TGTTCTGGAA CTTCCAGCTC AACAACTACT GGATGGAATC GCTCGAATAT
CGCTACCTGC CCGTGCATGT GAACAAGCAC AGCGCGCGCT ACCAGCCCGA CGGCAGCGTG
ATGATCGTGG TCGCGGCCGA GGACCCCGGC GTCGGCCATT TCCTGACCAC CGACGGTCAT
GCCACCGGCA CGATGCTGCT GCGCTGGGTG TTCGCCGACA GCGACCCGCA GCCGCGCTGC
CGCGTCGCCA AGATCGCCGA CCTGCGCGCC GGGAAATAA
 
Protein sequence
MATQLSPESH EERVYNGRAW EDFCDGLKAA GQVIFRPEAP DTMLDRAEGW RWLTRLTRAA 
LDMAVEYGDP AFPGFYQLSN HTIRIGADNP DNTYFNATIT ADHDYRISGY RGTAPILTFG
SKANRYAIDG TMATTGEIDQ RTLKVDENGY FEIIVSQKEH PGNWLRLEPD STMVIGRETF
LDRATEKPCA IRIERIGRVG GPPPLSAKQI DEALQETARW VHGTAKTFAD WAQLFAKDPN
DLPPVHQAMS INGGGDPTIR YYHGYWELKP DEALVIESEV PDCVFWNFQL NNYWMESLEY
RYLPVHVNKH SARYQPDGSV MIVVAAEDPG VGHFLTTDGH ATGTMLLRWV FADSDPQPRC
RVAKIADLRA GK