| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3634 |
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| Symbol | |
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| ID | 5199404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3992897 |
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| End bp | 3993679 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583189 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001264118 |
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| Protein GI | 148556536 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.71182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCGCGTC CCGCACCCGA ATATCCGCGC CCGTCCAACA TGATGGCGGG CAAGACCATG
CTGATCACCG CCGCCGCCGG CAGCGGCATC GGCGGCGCAT TGGCGCAGCG CGCGGCGGAG
GAGGGGGCGA CCCTGATGCT GTCCGACATG CACGAGCGGC GGCTAGGCGA AACCGCCGAC
CGCATCGCCG CGCTCGGCCT GCCGCGTCCC GAGACCTTCG CCTGCGACGT GACGCAGGAG
GAGCAGGTCC AGGCGCTCGT CGCCGCCGCG ATCGACCGGC TCGGTTCTGT CGACGTGCTG
GTCAACAATG CCGGCCTCGG CGGCAACGCG CCGGTCGTCG AGATGACCGA CGACCAGTGG
TTCCGGGTGA TCGACGTGAC GCTCAACAGC GTCTTCCGCA TGACCCGCGC GATCCTGCCG
CACATGTACG GGCGGCAGCG CGGGGCGATC GTCAACAACG CCTCGGTGCT CGGCTGGCGG
GCGCAGAAGC TGCAATCGCA TTATGCCGCC GCCAAGGCGG GGGTGATGGC CTTCACCCGT
TGCTCGGCGC TGGAAGCGGC CGAGCATGGC GTCCGCATTA ACGCGGTCGC GCCGAGCTTC
GCGATGCATC CCGCGCTCAG CAAGGTGACG CCGCCCGGCC TGCTCGAGGA ACTGGTCGGC
AAGGAGGCGT TCGGCCGCGC GGCCGAACCC TGGGAGGTGG CGAACGTCAT GCTGTTCCTC
GCCTCCGACC TGTCGTCCTA CATGACCGGC GAGGTCCTCT CCGTGTCGAG CCAGCAGGCA
TGA
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| Protein sequence | MARPAPEYPR PSNMMAGKTM LITAAAGSGI GGALAQRAAE EGATLMLSDM HERRLGETAD
RIAALGLPRP ETFACDVTQE EQVQALVAAA IDRLGSVDVL VNNAGLGGNA PVVEMTDDQW
FRVIDVTLNS VFRMTRAILP HMYGRQRGAI VNNASVLGWR AQKLQSHYAA AKAGVMAFTR
CSALEAAEHG VRINAVAPSF AMHPALSKVT PPGLLEELVG KEAFGRAAEP WEVANVMLFL
ASDLSSYMTG EVLSVSSQQA
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