Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3631 |
Symbol | |
ID | 5199401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3989730 |
End bp | 3990635 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640583186 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001264115 |
Protein GI | 148556533 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.761218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCA TCTGCCAGGA CCGCACCGTC ATCATCACCG GCGCCGCGCG CGGCCTCGGC AAATCCTATG CGCTGGCCTT CGCCCGCGAA GGGGCGAACG TCGTCGTCAA CGACATCGGC ACCAGCCTGC ACGGCGAGGG GCGCGACACA TCGGCCGCCG ACGCGGTGGT CGAGGATATC CGCGCCGCCG GCGGCAAGGC GGTCGCCAAT TATGACGACA TCACCGACTG GGACGCGGCG GGCCGGATCG TCCGCACCGC GATCGACAGC TTCGGCGGGC TCGACGTGGT GGTGAACAAT GCCGGCATCG TCCGCGATCG CATGTTCGTC TCGGCGACGC TGGAGGAATG GGACGCGACG ATGCACGTCC ACCTGCGCGG CCATTTCTGC GTCAGCCGCC ACGCGGTCGA CTATTGGCGC GCGCAGCAGA AGGCGGGCAA CCCCGTCGAC GCGCGGATCA TCAACACCAC CAGCAACGCC GGTCTCCAGG GATCGATGGC GCAGGCGGCC TATTCGACCG CGAAGGGCGG CATCGCCGCG CTGACCCTGG TGCAGGCGGC CGAGCTGGGC CGCTACGGCA TCACCGCCAA CGCGCTCGCC CCCGCCGCGC GCACCCGCAT GACCGAGGGC GCCTTCGCCG AGAAGATGGC GAAGGTCGAG AGCGGCTTCG ACGCGCAGGA CCCGGACAAT ATCGCGCCGA CCGTGGTGTG GCTGGGATCG GTCCAGTCGC GCGACGTCAC CGGCTGCGTC TTCGAGCTGG AAGGCGGGCG CATCTCGATC GAAGACGGCT GGGACCTCGG CCCGACGGCC GAGCAGCAGG CGCGCTGGAA CCCGGCCGAA CTCGGCCCCG TCGTCGCCGG CCTGCTGGCG CAGCGCAAGG CCCCGCGCAA GGTGTGGGGT AGCTGA
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Protein sequence | MAGICQDRTV IITGAARGLG KSYALAFARE GANVVVNDIG TSLHGEGRDT SAADAVVEDI RAAGGKAVAN YDDITDWDAA GRIVRTAIDS FGGLDVVVNN AGIVRDRMFV SATLEEWDAT MHVHLRGHFC VSRHAVDYWR AQQKAGNPVD ARIINTTSNA GLQGSMAQAA YSTAKGGIAA LTLVQAAELG RYGITANALA PAARTRMTEG AFAEKMAKVE SGFDAQDPDN IAPTVVWLGS VQSRDVTGCV FELEGGRISI EDGWDLGPTA EQQARWNPAE LGPVVAGLLA QRKAPRKVWG S
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