Gene Swit_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3616 
Symbol 
ID5198332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3974854 
End bp3975066 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content67% 
IMG OID640583171 
Producthypothetical protein 
Protein accessionYP_001264100 
Protein GI148556518 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.248385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC GGCTCATCAT CCTGCTCGCC AGGGCCTGGC AGATGGGCCC GTCGCTGGTC 
CTTCCCCCCA CCTGTCGCTA TGTACCGAGC TGTTCGGCCT ATACGATCGA GGCCGTCTCG
CGCTATGGCG CGCTCAAAGG CGGGTGGCTG GGGTTCCGCC GGATCTGCCG ATGCCACCCC
TGGGGTGGGT CGGGTTTCGA TCCGGTGCCC TGA
 
Protein sequence
MIGRLIILLA RAWQMGPSLV LPPTCRYVPS CSAYTIEAVS RYGALKGGWL GFRRICRCHP 
WGGSGFDPVP