Gene Swit_3612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3612 
Symbol 
ID5199397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3972071 
End bp3973579 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content74% 
IMG OID640583167 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_001264096 
Protein GI148556514 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.623512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.505683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCGC ATGTCGCGAC GGTCGCGTTT CTCGGGCTGG AGGCCCGTGC GGTCGAGGTG 
CAGGTGCAGG TCGCGCCGGG CATGCCCGCC TTCGTCGTCG TCGGCCTGCC CGACAAGGCG
GTGGCCGAAA GCCGCGAGCG GGTCCGCGCC GCGCTGTCGG CGATCGGCCT CGCGCTGCCG
CCCAAGCGGA TCACGGTGAA CCTGTCGCCC GCCGACCTGC CCAAGGAGGG ATCGCATTAC
GACCTGCCGA TCGCGCTGGG CCTGCTCGGC GCGATGGGGG TGATCGATGC CGAGACGCTG
GCCGCCTATG TCGTGGTCGG CGAGCTGGGG CTCGACGGCC GGGTCGCGCC CGCGCCCGGC
GTGTTGCTCG CCGCGCTCCA CGCCTCCGAA CGCGCCCTCG GGCTGGTCTG CCCGGCGGCG
CAGGGGCCCG AAGCCGCCTG GGCCGGCACG ATCGAGGTGA TCGGCGCGCC CGACCTGCTG
TCGCTGATCG GCCATTTCAA GGGCGGCGCT CCGCTGACCC CGCCGCTGCC CGGCAGCGCC
GAGGCCGTCG CGCCGCTGGC CGACCTGAAG CAGGTGAAGG GGCAGGAAAC CGCCAAGCGC
GCGCTGGAGA TCGCGGCCGC GGGCGGCCAC AACCTGCTGA TGAGCGGCCC GCCCGGCGCC
GGCAAGTCGC TGATGGCCGC CTGCCTCCCC GGCATCCTGC CCGATCTGAC GCCCGCCGAG
GCGCTCGAAG TGTCGATGGT CGCCTCGGTC GCGGGGGAAT TGCAGGACGG CCGGCTGATC
CGCGCCCGTC CGTTCCGCGC GCCGCATCAC TCGGCGTCGA TGGCGGCGCT GGTCGGCGGC
GGGATCAAGG TGCGGCCGGG CGAGGTCAGC CTCGCCCATC TCGGCGTGCT GTTCCTCGAC
GAGTTGCCCG AGTTCCAGCG CGCGGTGCTC GATTCGCTGC GCCAGCCGCT CGAAACCGGC
AAGGTCTCGG TCGCGCGCGC CAATGCGCAC GTCACCTTCC CGGCGCGCGT CCAGCTCGTC
GCGGCGATGA ACCCGTGCCG CTGCGGCCAT ATGGACGACC CCGCCCTCGC CTGCTCGCGC
GCGCCGAAAT GCGCGGCCGA CTATCAGGCG AAGCTGTCCG GGCCGCTGCT CGACCGCATC
GACCTCCATG TCGAGGTCGC CGCGGTCAGC GCCGCCGATC TCGTCCTGCC GCCGCCCGCC
GAGGGCTCGG CCGAGGTCGC CACCCGCGTC GCCGCCGCCC GCGCGCTCCA GACCGAGCGC
TACGCCGCGC ACGGCGCCCG CACCAACGCC GAGGCCGACG GCGAGCTGCT CGACGCGGTC
GCCACCCCCG ACGACGCCGG CCGCAAGCTG CTCGCCCAGG CCGCCGAGGC GATGCGCCTC
TCGGCGCGCG GCTATCACCG GGTGCTGCGG GTAAGCCGGA CGGTGGCCGA CCTGGCCGGA
TCGGAAACAG TCCAGCGCGT CCATATCGCC GAGGCGCTGA GCTATCGACG TCGGGCGCCG
GTCAGTTGA
 
Protein sequence
MVSHVATVAF LGLEARAVEV QVQVAPGMPA FVVVGLPDKA VAESRERVRA ALSAIGLALP 
PKRITVNLSP ADLPKEGSHY DLPIALGLLG AMGVIDAETL AAYVVVGELG LDGRVAPAPG
VLLAALHASE RALGLVCPAA QGPEAAWAGT IEVIGAPDLL SLIGHFKGGA PLTPPLPGSA
EAVAPLADLK QVKGQETAKR ALEIAAAGGH NLLMSGPPGA GKSLMAACLP GILPDLTPAE
ALEVSMVASV AGELQDGRLI RARPFRAPHH SASMAALVGG GIKVRPGEVS LAHLGVLFLD
ELPEFQRAVL DSLRQPLETG KVSVARANAH VTFPARVQLV AAMNPCRCGH MDDPALACSR
APKCAADYQA KLSGPLLDRI DLHVEVAAVS AADLVLPPPA EGSAEVATRV AAARALQTER
YAAHGARTNA EADGELLDAV ATPDDAGRKL LAQAAEAMRL SARGYHRVLR VSRTVADLAG
SETVQRVHIA EALSYRRRAP VS