Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3610 |
Symbol | |
ID | 5199395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3970092 |
End bp | 3971483 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640583165 |
Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
Protein accession | YP_001264094 |
Protein GI | 148556512 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0380] Trehalose-6-phosphate synthase |
TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.327269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGC TCGTCATCGT CTCCAACCGG GTGCAGCCGC CGATCGGCGA AGGCGGCAGC GGCGGGCAGG GCGGCCTCGC GGTCGCGCTG TCGGCGGCGC TGCGCGAATC GAGCGGCATC TGGTTCGGCT GGTCGGGCGA GACCACCGAG CAGTTCACCG GCCATATCAA CCTGCAGCGC AATTTCGGCG TCACCACCGC GACGATCGAC CTCGAGGAGC AGGACGTCGA CGAATATTAT AACGGCTATG CCAACCGGAC GCTGTGGCCG CTGTTCCACT ACCGGATGGA CCTGGCCGAG TTCGAGAGCG GCTTCGCCGA GGGCTATGAA CGGGTCAACC AGCGCTTCGC CGAGACGCTC GAGCCGCTGA TCGAGGCCGA CGACCTCGTC TGGGTCCACG ACTATCACAT GTTCCCGCTC GGCCAGTATC TGCGCGACCG GGGGATTGCG AACCGGATCG GCTTCTTCCT CCACATCCCC TGGCCGCCCT ATCGGCTGCT GCTGTCGCTG CCCAACCACC GCCAGCTTGC CGAAACGCTG TTCGCCTATG ACGTGGTCGG TTTCCAGACG CGCGATTCGC TCGACAGCTT CCGCGACTAT GTCATCCAGG AAATGGGCGG TTCGTTCGGC GAGGACGGGC GGATCATCGT CGGCGATCGT TCGATCATCG CGATTCATTG TCCGATCGGC ATCGATACCG ACAATTTCGT CGAGGCGACC CGGTCGACCG CCGCGCGCCA TGCCCATCAC CGGATGCGGG AGAGCGCCAA CGGCCGCGAG ATGATCATCG GCGTCGATCG GCTCGATTAT TCGAAGGGGT TGCAGGAACG CTTCCTCGGC TATGAGCGGC TGCTCCAGCA GAACGAGAAG ATCCATGGCG AGGTCTTCCT GCTGCAGATC GCGCCGCCGT CGCGCAGCGA CGTCCAGAGC TACCAGGAGA TCCGGGCCTC GCTCGATTCG CTGTCGGGGC GGATCAACGG CGCCTATGCC GATGTCGAAT GGGTGCCGAT CCGCTACGTC AACCGCGGCT ATCCGCGCGA CCGGCTGGCC GGCATCTATC GCGCCGCCAG GATCGGCCTC GTCACCCCGC TGCGCGACGG GATGAACCTG GTCGCCAAGG AATATGTCGC CGCGCAGGAC CCGGAGGACC CCGGCGTCCT GATCCTCTCC CGCTTCGCCG GCGCGGCCGA GCAGCTCACC GAGGCGCTGC TGATCAATCC CTACAGCGCC GAGGAGATCG CCGACGCGAT CGAGCAGGCG CTGGCGATGC CGCTGGAGGA GCGCCGGGAG CGCTGGCGCG CCTGCATGGA CAATGTCGAG AAGGAGGACG TGATGTGGTG GCGCCGCCGC TTCACCGCCG CGCTCGAAGC GGTGACGCAG TCGGCGGCGT GA
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Protein sequence | MSRLVIVSNR VQPPIGEGGS GGQGGLAVAL SAALRESSGI WFGWSGETTE QFTGHINLQR NFGVTTATID LEEQDVDEYY NGYANRTLWP LFHYRMDLAE FESGFAEGYE RVNQRFAETL EPLIEADDLV WVHDYHMFPL GQYLRDRGIA NRIGFFLHIP WPPYRLLLSL PNHRQLAETL FAYDVVGFQT RDSLDSFRDY VIQEMGGSFG EDGRIIVGDR SIIAIHCPIG IDTDNFVEAT RSTAARHAHH RMRESANGRE MIIGVDRLDY SKGLQERFLG YERLLQQNEK IHGEVFLLQI APPSRSDVQS YQEIRASLDS LSGRINGAYA DVEWVPIRYV NRGYPRDRLA GIYRAARIGL VTPLRDGMNL VAKEYVAAQD PEDPGVLILS RFAGAAEQLT EALLINPYSA EEIADAIEQA LAMPLEERRE RWRACMDNVE KEDVMWWRRR FTAALEAVTQ SAA
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