Gene Swit_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3598 
Symbol 
ID5196517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3958030 
End bp3958692 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID640583153 
ProductDSBA oxidoreductase 
Protein accessionYP_001264082 
Protein GI148556500 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.432657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC CGATCAAGAT CGACTTCGTC TCCGACATCT CCTGCCCATG GTGCGTCATC 
GGGCTGCGCG GGCTGGAACA GGCCATCGAG CGGACCGGCG GCGAACTGGC GGCCGAAATC
CATTTCCAGC CGTTCGAGCT CAACCCGGCG ATGGCGAAGG AGGGCGAGAA TCTCGCCGAG
CACGTCGCCC ATAAATATGG CTCGACCCCC GAGCAGTCGG CCGCGACGCG CGAGATGATC
CGTGACCGCG CCGCGCAGGT CGGCTTCGCG ATCAACCATG GCCCCGACAG CCGCATCTAC
AACACCTTCG ACGCGCACCG TCTGCTCCAC TGGGCGGGCA CGCTCGGCGG CGAGCGGCAG
CGGGCGCTCA AGCACGCGCT GTTCGAATCC TATTTCACCG AGCAGCGCGA CCCGTCCGAC
CGCGCCGTGC TGATCGACGC GGCGGCGGAG GCCGGGCTGG ACCGCGACGA GGCCGCCGCG
GTGCTCGCCT CGGACCGCTA CGCCGCCGAG GTGCGCGATG CCGAGCATCT GTGGCAGCGG
CGCGGGGTCC ATTCGGTGCC GGCGATCATC GTCGACGACC GCTACCTGAT CTCCGGCGGC
CAGCCCGCCG ACGTGTTCGA GCAGGTGTTG CGCTCGATCG CGGCGGAGAA GGCCCCGGCC
TGA
 
Protein sequence
MATPIKIDFV SDISCPWCVI GLRGLEQAIE RTGGELAAEI HFQPFELNPA MAKEGENLAE 
HVAHKYGSTP EQSAATREMI RDRAAQVGFA INHGPDSRIY NTFDAHRLLH WAGTLGGERQ
RALKHALFES YFTEQRDPSD RAVLIDAAAE AGLDRDEAAA VLASDRYAAE VRDAEHLWQR
RGVHSVPAII VDDRYLISGG QPADVFEQVL RSIAAEKAPA