Gene Swit_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3589 
Symbol 
ID5197258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3951275 
End bp3952018 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID640583144 
Productmetallophosphoesterase 
Protein accessionYP_001264073 
Protein GI148556491 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.242712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.408277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCG CCGCCATCTC CGACATTCAC GGCAATCTCG CCGCGCTCGA CGCGGTGCTG 
GCCGACATCG GCCGGCGCGG CGTCGACCGG ATCGTCAACC TCGGCGACAT CCTGTCGGGC
CCGCTCGACC CCGCCGCCAC CGCCGACCGG CTGATCGCGC TCGACCTGCC GACGATCCGC
GGCAATCACG AGCGGCAGCT CCTGACCCTC GAGCCGGCGG CGATGGGGGC GTCAGACGCC
CATGCCGCCC CGCTGCTCAC CGACGCGCAC CGCGCCTGGC TGACGAGCCT GCCCGCGACG
ATGCGGCTCG CGCCCGACAT ATTGCTCTGC CACGGCACGC CGGACAGCGA CCTCGATTAT
TATCTCGACC ATGTCGATGC GGCGGGCACG CGCGCCGCGA CGCCGGAAGA GATCGCCGCC
AGGACCGGGC CGGAAACCGC CGCGCTGATC CTCTGCGGCC ACACCCACCT GCCCCGGACC
CATCGCCGTC CGAGCGGGCA GATGATCGTC AATCCCGGCT CGGTCGGCCT GCCCGCTTAT
GCGGACGACC GCCCCTTCCC GCACGTCATG GAAAGCGGAA CGCCGCAGGC GCGCTATGCG
ATCGCCGAGC GGCGGGCCGA CGGCCGCTGG ACCGCCGAGC CGATCGCGGT CGACTATGAC
TGGGAGGCCG TCGCCCGCAC CGCCGAAGCG CGCCAGCGGC CCGACTGGGC GATCGCGCTC
CGCACGGGAC GAATGGGTTC CTAG
 
Protein sequence
MRIAAISDIH GNLAALDAVL ADIGRRGVDR IVNLGDILSG PLDPAATADR LIALDLPTIR 
GNHERQLLTL EPAAMGASDA HAAPLLTDAH RAWLTSLPAT MRLAPDILLC HGTPDSDLDY
YLDHVDAAGT RAATPEEIAA RTGPETAALI LCGHTHLPRT HRRPSGQMIV NPGSVGLPAY
ADDRPFPHVM ESGTPQARYA IAERRADGRW TAEPIAVDYD WEAVARTAEA RQRPDWAIAL
RTGRMGS