| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3586 |
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| Symbol | |
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| ID | 5197255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3948998 |
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| End bp | 3949594 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583141 |
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| Product | alkylhydroperoxidase |
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| Protein accession | YP_001264070 |
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| Protein GI | 148556488 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00777] alkylhydroperoxidase, AhpD family
[TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.35684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.650072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGGCC TCCGCGCCCT CTTTTTTTTG ACCGTCGCCC CGTCCCGTTC GTTTGATTGT
CGAGAGGAAG ATTCGATGTC GCTCAAGGAA TTCGCCGACG CCCTGCCCGA CTATGCCAAG
GACATCCGGC TCAACGTCGG CTCGCTGCTC GGCGACCAGA CGCTGACCGA GCAGCGCAAA
TATGGCCTGC TGCTCGCCTG CGCCCATGGC TCGGGCTACA AGCCGATCGT CGAGGCGACC
GAGGCCGAGG TGGCCGGCAA GCTGAGCCCC GAGGCGGCCA ACGCCGCCCG CGCCGCCGCC
GCGGTGATGG CGATGAACAA CGTCTATTAC CGCTTCGTCC ATCTCGCCTC GAACAAGGAA
TATGGGCAGA TGCCGGCCAA GCTGCGGATG AACGTGATCG GCTCGCCCGG CATCGAGAAG
GACGATTTCG AGCTGTTCAG CCTCGCCGTG TCGGCGATGA ACGGCTGCGG CCTGTGCATC
GACAGTCATG AGAAGGTGCT GCGCCAGCAC GGCGTCGCCG CCGACGTGAT CCAGACCGCC
GCGCGCGTCG GCGCGGTGAT CAAGGCGGCC GCCACCGTCC ACGCGACGGC GGTGTGA
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| Protein sequence | MAGLRALFFL TVAPSRSFDC REEDSMSLKE FADALPDYAK DIRLNVGSLL GDQTLTEQRK
YGLLLACAHG SGYKPIVEAT EAEVAGKLSP EAANAARAAA AVMAMNNVYY RFVHLASNKE
YGQMPAKLRM NVIGSPGIEK DDFELFSLAV SAMNGCGLCI DSHEKVLRQH GVAADVIQTA
ARVGAVIKAA ATVHATAV
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