Gene Swit_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3585 
Symbol 
ID5197254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3948148 
End bp3948849 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID640583140 
ProductSerine O-acetyltransferase 
Protein accessionYP_001264069 
Protein GI148556487 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.564817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.437903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACG GACTGATTTC CTACCTCGAT TCGATCAAGG CGCGTGATCC CGCGCCCCGG 
TCCCGGTGGG AGGTGATGCT CTATCCCGGC GTGCTCGCGC TGGGGCTCCA CCGCGTGGCG
CACTGGCTGT TCCAGGCCGA GCTCTATTTC CTCGCGCGCT TCGTGAACCA CTTCTCGCGG
ATGATCACCG CGATCGACAT CCATCCGGGC GCGCAGATCG GCCGCAACTT CTTCATCGAC
CATGGCTTCG TCGTGATCGG CGAGACGGCG GTGATCGGCA ACGACGTCAC CATCTACCAG
GGCGCGACGC TGGGCGGCAC CAATCCGACC AACGGCGAGG GCGGCAAGCG CCATCCGACG
ATCGGCGACG GCGCGATCAT CAGCCTGGGC GCGGCGATCC TCGGCCCGAT CACGGTCGGC
GCGCGCGCGC GGGTCGGCGC CAATGCGGTC GTCACCCGCG ACGTCGCCGA GGGCCAGGTC
GTGGTCGGCA TCCCGGCCAA GCCGATGCTG GTCGATGCCA AGGAATATCA GAAGGGCTTC
GTGCCCTATG GCACGCCGTG CAGCGAGCGC TTCGACCCGC AGACCCAGCA GCTCGAAATC
TTGCGCTGCG AACTGGAGGT GCTGCGCGGC CGCATCGCCA AGCTGATCGA CGAGCGCGAC
GCCGCGCGCG CCAAGATCGA CGAGGATCGC GAACGGGCCT GA
 
Protein sequence
MFDGLISYLD SIKARDPAPR SRWEVMLYPG VLALGLHRVA HWLFQAELYF LARFVNHFSR 
MITAIDIHPG AQIGRNFFID HGFVVIGETA VIGNDVTIYQ GATLGGTNPT NGEGGKRHPT
IGDGAIISLG AAILGPITVG ARARVGANAV VTRDVAEGQV VVGIPAKPML VDAKEYQKGF
VPYGTPCSER FDPQTQQLEI LRCELEVLRG RIAKLIDERD AARAKIDEDR ERA