Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3569 |
Symbol | |
ID | 5196558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3933179 |
End bp | 3933832 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640583124 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001264053 |
Protein GI | 148556471 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.773564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGTCG TAGACAAGGA TGGACTGCCG GTGGCTGCAT CGAAGAAGGC CGATTGTTGT GGCGGCGACA TGACGGGTCT CAAGAAGACC GCAGCGACTC GCGTGTTCGA GGCGGCGCGC GATCTTTTCT ACCATCGCGG CATCCGCGCC GTCGGCGTCG ACGAGATCGT CTGCAAGGCG GGCGTGACCA AGCCCAGCCT GTATCGCGCC TTCGCCTCCA AGGATGATCT GATCGCCGCC TGCCTGGAAG AAAGCGGCCG CGAAAGCCGC GCCGCGCTCG AATCGGTGCT GGAGGAAGGC GGCGAGAATC CGCACGACAA GCTCCGCGCG ATGATGCGCC ATTTCGCCCG CAAGATCGCC GCCCCCGATT TCCGCGGCTG CCCGATGAGC AACACCGCGG TCGAGATTCC CGAGCCCGGC CATCCGGGCC GCACCGTCCT CGAAAATTGC AAGGCCGACA TGCGCGCGAT GATCGCGGCC GTGACCCGGC AGCTCGACAT CGACGATCCC GAGGAGCTGG CCGACGGGCT GATGCTGATC ATCGAGGGCG GCATGGCGAC CCATCACATC TTCGGCAGCC AGGGCCCCTG CGCGACGATG GTCGCGGCGA GCGACGCGCT GATCGACGCC TATCTGGCCA AGCGCCCCGC CTGA
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Protein sequence | MVVVDKDGLP VAASKKADCC GGDMTGLKKT AATRVFEAAR DLFYHRGIRA VGVDEIVCKA GVTKPSLYRA FASKDDLIAA CLEESGRESR AALESVLEEG GENPHDKLRA MMRHFARKIA APDFRGCPMS NTAVEIPEPG HPGRTVLENC KADMRAMIAA VTRQLDIDDP EELADGLMLI IEGGMATHHI FGSQGPCATM VAASDALIDA YLAKRPA
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