Gene Swit_3569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3569 
Symbol 
ID5196558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3933179 
End bp3933832 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID640583124 
ProductTetR family transcriptional regulator 
Protein accessionYP_001264053 
Protein GI148556471 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.773564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTCG TAGACAAGGA TGGACTGCCG GTGGCTGCAT CGAAGAAGGC CGATTGTTGT 
GGCGGCGACA TGACGGGTCT CAAGAAGACC GCAGCGACTC GCGTGTTCGA GGCGGCGCGC
GATCTTTTCT ACCATCGCGG CATCCGCGCC GTCGGCGTCG ACGAGATCGT CTGCAAGGCG
GGCGTGACCA AGCCCAGCCT GTATCGCGCC TTCGCCTCCA AGGATGATCT GATCGCCGCC
TGCCTGGAAG AAAGCGGCCG CGAAAGCCGC GCCGCGCTCG AATCGGTGCT GGAGGAAGGC
GGCGAGAATC CGCACGACAA GCTCCGCGCG ATGATGCGCC ATTTCGCCCG CAAGATCGCC
GCCCCCGATT TCCGCGGCTG CCCGATGAGC AACACCGCGG TCGAGATTCC CGAGCCCGGC
CATCCGGGCC GCACCGTCCT CGAAAATTGC AAGGCCGACA TGCGCGCGAT GATCGCGGCC
GTGACCCGGC AGCTCGACAT CGACGATCCC GAGGAGCTGG CCGACGGGCT GATGCTGATC
ATCGAGGGCG GCATGGCGAC CCATCACATC TTCGGCAGCC AGGGCCCCTG CGCGACGATG
GTCGCGGCGA GCGACGCGCT GATCGACGCC TATCTGGCCA AGCGCCCCGC CTGA
 
Protein sequence
MVVVDKDGLP VAASKKADCC GGDMTGLKKT AATRVFEAAR DLFYHRGIRA VGVDEIVCKA 
GVTKPSLYRA FASKDDLIAA CLEESGRESR AALESVLEEG GENPHDKLRA MMRHFARKIA
APDFRGCPMS NTAVEIPEPG HPGRTVLENC KADMRAMIAA VTRQLDIDDP EELADGLMLI
IEGGMATHHI FGSQGPCATM VAASDALIDA YLAKRPA