| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3561 |
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| Symbol | |
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| ID | 5199533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3921316 |
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| End bp | 3923457 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583116 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001264045 |
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| Protein GI | 148556463 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTCA ACAACAAGAT ACTCGCCGCG CTGATGGGCT CCGCCCTCGC CATGCCGGCC
TTCGCGGCCG ATGCCGATGC GGACGCCGCG CCGAACCGCG ACGACATCAT CGTCCTGGGC
CAGCAGATGA AGGCCGCGCC CAACGCCGGC AAATCCGACG TGCCGCTGAT CGAGACGCCC
CAGGCGATCT CGATCATCTC GACCGAGCAG CTCAAGGCGC GCGGCGTCGT CCGCCTCGCC
GAGGCGCTGC GCGGCGTCGC CGGCGTCTCG CGCAGCAGCA CCTATGGCTA TTATGACGCC
TATCAGATCC GCGGCTTCGA CGCGGCCTAT GGCAGCGTCT ACCTCGACGG GCTGATCAGC
CAGAACGTCG CCGGATCGAA CAACGAGCTC GCCGGCCTCG AACAGATCGA GGTGGTGAAG
GGCCCGGCGT CGATGCTGTT CGGATCGGCG CCGCTCGGCG GCATCATCAA CCTGGTCAGC
AAGCGGCCGC GCGACGACGA CTTCGTCGAT GTCGGCCTCG CCACCGGCTC CTACAATCTG
GTCGAGGGGA CGGTCGACGC CAACATGCGG CTCGACGCGG CGGGCACCCT GCTCGCGCGG
CTCAACCTAG TCTATCGCGA CAGCAACGAC TTCGTCCGCT TCGCCGACAA GAACCGCATC
CACATCGCCC CGGCGCTGAC CTGGCGGATG GGCGAGGACA GCGAGCTGAC CCTGCTCACC
CGCTACGAGC GCAACCATGA CTCGCCCTGG TCGCCGGTCT CCGCCTGGGG GACGGTGCTG
CCGAGCGCGC ATGGCAAGCT GCCGATCGAC TTCACCATCA ACGGCAAGGA TTCGAAGGCG
ATCCACAACC AGCGCTATTA TCATCTCGGC TACGCCTTCA AGCACCGCTT CTCGGACGCG
CTCTCCTTCG ACCAGACGCT GCGCTACACG GACCGCAAGG TCTATTGGAA CAACTGGATC
TTCTGGGCCG GCTTCGTCGA CGGCGCGGTG GTCGACGGCG TCCAGCAGGG GCATGTCGCC
GGCCGCTACG TCTACGGCCC GTTCCGCCAG CGCGACAAGG ACCTCTCCAC CGACGGCCAT
TTCACGCTGA GGGTCGAGAC CGGCCCGGTC AGCCACGAGA TATTGGTCGG CCTCGACTAT
CGCCGGAACC GCAGCCGCTT CGCCGATGAC GGCGGCAATT TCGATCCGAG CGCCAACCCG
CTCGACATCC TCGCCCCCGA CTATGATCGA CCCTTCGTCC ACGATCCGGC GGCCGCCTAT
GGCGGCGGCG GCAAGTCCGA CCAGACCGGC CTCTACATCC AGGACCATGT CCGCTTCGGC
GAGCGCGCGA CGCTGACCCT GGGCGGCCGC TATGACTGGG CGCACAGCGA CGGCGGCGTG
AAGGACCACA AGTTCAGCCC GCGCGTCGGC GCGACCTACG TCGTCCTGCC CGGCGCGTCG
CTCTATGCGA GCTGGTCGAA ATCCTTCGTG CCGCAGGCCG GCTCCTTCAC CGTCGCCGGC
GACGCCCTGC CGCCCGAGAC CGGCCGCAAC ATCGAGACCG GCATCAAGGT CCAGAGCCCC
GACAGCCGGC TGACCGGCAT GGTCTCGATC TTCGAGCTGA CCCGGCAGAA CGTCGCGACC
GAAGACCCGG CCAACCCCTT CTTCTTCATC AGCACGGGCG AGCAGCGCAG CCGCGGCGTC
GAGGTCGAGG CGACCTGGCG GCCGACCCCG GCCTGGACGC TGTCGATCGC CTATGCCTAT
CTCGACGCCA AGATCACCAG GGACAACCTC CTCCCGGTCG GCGCGCGGTT GCAGAACGTG
CCCAGGCACA ACCTCAACCT GTTCGGCGAA TATGTCGTGC CGCAGGGGCC GCTCGCCGGC
CTCGGGCTGA ACCTCGCCTT CCAGTACAAC AGCGACAAGA TCGGGGCGAA CTATCCCGAG
GATGTCAACG GCGACGGCGT GCCCGATCCG ATCGCGGCCT TCACGCTGCC CAGCTATGCG
CTGGTCGACG CCGGCATCTC CTACCGCTTC GGGCCGTGGG GCGTCCGCCT CAACGTCAAC
AACCTGTTCG ACAAGCGCTA CTTCCCCGAC GCCTGCTGCG TCGACCGCGT CACGCCGGGC
GAACCGCGCA ACTGGCGCCT CTCGCTCACC CGCAGCTTCT GA
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| Protein sequence | MSFNNKILAA LMGSALAMPA FAADADADAA PNRDDIIVLG QQMKAAPNAG KSDVPLIETP
QAISIISTEQ LKARGVVRLA EALRGVAGVS RSSTYGYYDA YQIRGFDAAY GSVYLDGLIS
QNVAGSNNEL AGLEQIEVVK GPASMLFGSA PLGGIINLVS KRPRDDDFVD VGLATGSYNL
VEGTVDANMR LDAAGTLLAR LNLVYRDSND FVRFADKNRI HIAPALTWRM GEDSELTLLT
RYERNHDSPW SPVSAWGTVL PSAHGKLPID FTINGKDSKA IHNQRYYHLG YAFKHRFSDA
LSFDQTLRYT DRKVYWNNWI FWAGFVDGAV VDGVQQGHVA GRYVYGPFRQ RDKDLSTDGH
FTLRVETGPV SHEILVGLDY RRNRSRFADD GGNFDPSANP LDILAPDYDR PFVHDPAAAY
GGGGKSDQTG LYIQDHVRFG ERATLTLGGR YDWAHSDGGV KDHKFSPRVG ATYVVLPGAS
LYASWSKSFV PQAGSFTVAG DALPPETGRN IETGIKVQSP DSRLTGMVSI FELTRQNVAT
EDPANPFFFI STGEQRSRGV EVEATWRPTP AWTLSIAYAY LDAKITRDNL LPVGARLQNV
PRHNLNLFGE YVVPQGPLAG LGLNLAFQYN SDKIGANYPE DVNGDGVPDP IAAFTLPSYA
LVDAGISYRF GPWGVRLNVN NLFDKRYFPD ACCVDRVTPG EPRNWRLSLT RSF
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