| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3560 |
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| Symbol | |
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| ID | 5199532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3919166 |
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| End bp | 3921298 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583115 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001264044 |
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| Protein GI | 148556462 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTC CCAGCCTCGC CCTGCGCCTC GCGCTCGTCG CGACCACCGC CCTGCTGCCG
ATCGCGGCCC ATGCCGCCGA CGCCGCCGAC GCGGACGCCG ATGCCGCCGA CGCCAGCCAG
CAGATCATCG TCACCGGCCT GCTCGAACGC ACCAACAGCG GCACCAAGAC CGACACGCCG
CTGACCCAGA CGCCGCAGGC GCTGACCGTC GTCACCGACG ACGTCTACCT GGCGCAGGGC
GCGCTCTCGG TCTCCGACAC GCTGCGCTAC GTCTCGGGCG TGATCGCCAA TCCCTATGGC
CCCGACAGCC GGGTCGACGG CGCCTTCATC CGCGGCATCG ACGCGCTCCA GTTCCGCGAC
GGCATGCGCG ACATCTTCAG CTATTATGCC AGCATCCGCG CCGACCCGTA CAACTTCTCC
CGCGTCGACG TGGTGCGCGG CCCGGCCTCG GTGCTGTTCG GGCAGGGCTC GATCGGCGGG
CTGATCAACC TCGCCTCCAA GGTGCCCGAG TTCCAGACGG CGGGCGAGGT CTCGCTGCGC
TACGGATCGT TCGACCGCAA GGAGGCGCTC GCCGACCTGA CCGGGCCGCT GACCGACGGC
CTCGCCGCCC GCATCGTCGC CCGCGTCCGC GACGCCGATA CCCAGACCGA CCATGTCCCC
GACGACCGGG TGATGGTGTC GCCGTCGCTG CGCTGGCAGC CGGGCGAGGA CACCGACGTC
ACCCTGCTCG GCCTCTACCA GGAGGATGAC GGCGGCTCGA CCGCGCAGTT CCTGCCGCTG
GTCGGCACGC TCTACCCGAA CCCGAACGGC AAGCTCGGCA ACGGCCTGTT CATCGGCAAG
CCGGGCTGGG ACCGCTATGA CGGCCGCCTG CTGCAAGGCA CCGGCATCGT CGAGCATCGC
CTGAACGACC AGGTGAAGCT CAGCCTCAAG GCGCGCTATA TCGACAGCGA CGTCACCTAT
CTGACCCATT ATCCGGACAG CTACGCCAAT CCGGACGATC CCTATCTCGA TCCCGCCAAG
CGGATCATCG GCCTCTATGC CGACGGCAGC TATGCGCGGA TGAACATCTT CTCCACCGAC
AACAACATCC AGTTCAAGTT CGACACCGGC GCCGGCATCG AGCATCTGGT GCTGGCCGGC
ATCGACTATA GCTGGAACCG CGTCCGCAAG ACCGGCGGCT TCGACTATGA GTTCATCGAC
ATCTACGACA TCGATTATGC CGCGCTGTCG AACTTCGGCG GCGGCCTGCC GACCGCCTTC
ACCTCCAGCG AGGACACCCG CCAGAAGCAG ATCGGCGTCT ATATCCAGGA CCAGGTCCGG
CTGTGGGACC GCGTGTCGAT CGTCGTCGGC GGGCGGCGCG ACCATGTCCG CACCAAGGCG
GCGGGCTCCC CGGCGGAGAA GGAGAACGCC ACCACCTTCC GCGCCGGCAT CATCGCCGAG
ATCGTCAAGG GCGTGTCGCC CTTCTTCAGC TACACCGAAT CCTTCGAGCC GATCTCGGGC
ACGACGATCA CCGGCGACCC GTTCAAGGCG AAGACCGGGC GGCAGTTCGA GGGCGGCGTC
AAATTCCACC CCGACGCCCG GACGCTCGTC ACCCTGACCG CCTATGACAT CCGCGAGCAC
AACCGCCCGG TCGAGATCGT CATCGACGAC GGCAGCGGCG GCACGATCCG GGGCCAGACC
CAGATCGGCA CGATGACCTC GAAGGGTTTC GAGGTCGAGG CGAGCCGCGA CCTGCCCGGC
AATTTCCAGC TCATCGCCAA TTACAGCTAC AACAAGGCCG AACCGAGCGA CACCGGCGTC
CAGCTCGACA ACGTCCCGAA GAAGAGCGCG TCGCTTTGGG GCACCAAGAC CCTGGCCGTC
GATCCCGACA CCAGCCTCCG CCTCGGCGGC GGCGTCCGCT ATGTCGGCGT CAACTATTCG
CGGACGATCG GCGCCACCAG CACCAGGATC GTCCGCACCC CGTCCTACAC GCTGTTCGAC
GCGCTGGCGG AGGTGAGCTG GCGCGACTGG TCGTTCGCGA TCAACGCGAC CAACCTGTTC
AACAAGAAAT ATTATGCCGC CTGCCTGTCG CGCGGCGACT GCTTCATCGG GGCGGAGCGC
AACATCTTCG CCACCGTGAC CCGGCGTTTC TGA
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| Protein sequence | MNRPSLALRL ALVATTALLP IAAHAADAAD ADADAADASQ QIIVTGLLER TNSGTKTDTP
LTQTPQALTV VTDDVYLAQG ALSVSDTLRY VSGVIANPYG PDSRVDGAFI RGIDALQFRD
GMRDIFSYYA SIRADPYNFS RVDVVRGPAS VLFGQGSIGG LINLASKVPE FQTAGEVSLR
YGSFDRKEAL ADLTGPLTDG LAARIVARVR DADTQTDHVP DDRVMVSPSL RWQPGEDTDV
TLLGLYQEDD GGSTAQFLPL VGTLYPNPNG KLGNGLFIGK PGWDRYDGRL LQGTGIVEHR
LNDQVKLSLK ARYIDSDVTY LTHYPDSYAN PDDPYLDPAK RIIGLYADGS YARMNIFSTD
NNIQFKFDTG AGIEHLVLAG IDYSWNRVRK TGGFDYEFID IYDIDYAALS NFGGGLPTAF
TSSEDTRQKQ IGVYIQDQVR LWDRVSIVVG GRRDHVRTKA AGSPAEKENA TTFRAGIIAE
IVKGVSPFFS YTESFEPISG TTITGDPFKA KTGRQFEGGV KFHPDARTLV TLTAYDIREH
NRPVEIVIDD GSGGTIRGQT QIGTMTSKGF EVEASRDLPG NFQLIANYSY NKAEPSDTGV
QLDNVPKKSA SLWGTKTLAV DPDTSLRLGG GVRYVGVNYS RTIGATSTRI VRTPSYTLFD
ALAEVSWRDW SFAINATNLF NKKYYAACLS RGDCFIGAER NIFATVTRRF
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