Gene Swit_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3544 
Symbol 
ID5196181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3904388 
End bp3905131 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID640583099 
Productmethyltransferase type 11 
Protein accessionYP_001264028 
Protein GI148556446 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.51858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACA GCTACGCGGC CATCTTCGCG CGCCGGGCGG ACGGCTACTG CCGCGCGATG 
GCGCATCATC CGCAGGCCCG TGATGCCGAG TTCGGCGCGG TGGTCGATCC GCTCGATCCG
GCCGCCCGGA CCGTGATCGA CATGCCGGCC GGCGGCGGCT GGCTGCGTCG CTACCTGCGC
GCCGGGGTCC ATTATGTCGC GGTCGAGCCT GCCGAGCTGT TCTTCGACCT CTGCCCGCAG
GACGAAAGCG CCGATCGCGT GCGCGCGGCG GTCGAGGCGG TGCCGCTGCC CGATGCGGCG
GCGGACGCGA TCGTCTCGCT CGCGGGCCTC CATCACGCCC CCGATCTCGG GGCGATCTTC
GCCGAGGCAT ATCGGCTGCT GCGGCCCGGC GGTCAGCTCG TCATCGCCGA CGTCGCGGCC
GGGAGCCGGG AGGACCAGTT CCTCAATCGC TATGTCCACG CCCATAACCC GATGGGGCAT
GAGGGCGTCT TCCTCGACGA TGGAACCGCC GGCCTGCTGC GCCGCGCCGG CTTCGAGGTG
CTGGCGGAGG AGCAGGCGCC CACGCCATGG CGGCTGGGCA GCGCCGAGCA GGCGGGCGCC
TATTGCGCCG ACCTGTTCGG GATCGAGGGG CAGACACCGG CCCAGGTGGC GGCGGCGCTG
AAGGACATCG TCGGCGCGAC CGACGGCGGG GACGGCTTCG TGCTCGGCTG GAGCCTGCGG
CGGCTGATCT GCCGCAAGCA CTGA
 
Protein sequence
MLDSYAAIFA RRADGYCRAM AHHPQARDAE FGAVVDPLDP AARTVIDMPA GGGWLRRYLR 
AGVHYVAVEP AELFFDLCPQ DESADRVRAA VEAVPLPDAA ADAIVSLAGL HHAPDLGAIF
AEAYRLLRPG GQLVIADVAA GSREDQFLNR YVHAHNPMGH EGVFLDDGTA GLLRRAGFEV
LAEEQAPTPW RLGSAEQAGA YCADLFGIEG QTPAQVAAAL KDIVGATDGG DGFVLGWSLR
RLICRKH