| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3532 |
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| Symbol | |
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| ID | 5197370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3888447 |
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| End bp | 3889949 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583087 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001264016 |
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| Protein GI | 148556434 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.204576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.220833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTGA CCACGGCGAT CATGGCCGCG ACGATCCTCG TCGTGCTCGA CCAGACGATC
GCGACCGTGG CGCTGCCGCA CATGCAGGCG GCGCTGGGCG CGACGCCCGA CACGGTCACC
TGGGTGCTGA CCTCCTACAT CATGGCGACG GCGGTCGGTA CGCCGCTCAC CGCCTGGCTG
ACGGGGCGCT TCGGCCGCCG CCAGGTGTTC CTGGTCTGCG TCCTCGGCTT CACGATCAGC
TCGATGCTGT GCGGCGCCGC GACCTCGCTG CCGATGATGG TCGCCTGCCG GCTGGCGCAG
GGCTTCTTCG GCGCCTTCCT GATGCCGATG TCGCAGGCCT TCCTCTACGA CATGAATCCG
CCCTCGCTGC AGGTCCGCGC GATCACCATG TGGGGGATCG GCGCGATGGT CGGGCCGATC
GTCGGGCCGG TGCTGGGCGG CTATCTGACC GACGCCTTCG ACTGGCGCTG GGTGTTCTTC
GTCAACGTGC CGGTCGGCAT CGTCGCGCTG GCCGGCGTCT TCTTCGGATT GCCCGAATTC
CCGTCGGCAC GGCGGTCGTT CGACCATGTC GGCTTCATCA TGATCGCGGT CGCGCTCTGT
TCGCTCCAGC TCGCGCTCGA TCGCGGCACC CAGCAGGACT GGCTCGATTC GCCCGAGATC
ATCGCCGAGT TCGGCCTCAG CATCGCCGCC TTCTGGATGC TGATCTTCCA TCTCCGCCGC
TCGCGCCATC CGATCATCTC GCCGGGGTTG TTCGCCAATC CCAGCTTCTC CGGCGCGATG
GTGCTCGCCT TCGTGCTGAT GCCGACGATC ATCGCCAGCA ACGCGCTGCT GCCGCAGCTC
TTCGTCCAGC TGCTCGGCTA TCCGGTCGCG ACCGCGGGGG AGATGATGCT GCCGCGCGGC
ATCGCCATGA CGATCGGCAT CTTCCTCGGC GGACAGTTCA CCCGCTGGAT GGACGGCCGG
CTCCAGGTCG CGCTGGGGGT CTGCATCGTC ATCGCCTCGC TCTACGTCCA GACCGGCTTC
AACATGGAGA TGGACCAGCA TCTGATCATC TGGGCGGGGG TGCTGCAGGG CTTCGGCACC
GGCCTGTCGA TGACGGTGCT CAACTTCACC GCCATGTCGA GCGCGCCGCT CTCGCACCGG
ACCGAGGCGG CGGCGCTCTA TTCGCTGTCG CGCAACACCG GCTCGTCGAT CATGCTGGCG
ATCTTCTCGG GACTGCTGGC GCACGACGTC CAGGTCAACC ATGCCGAGCT CGGCGCGCGG
ATATCGTCGG GCGGCGGGAT GTCGCTGCAC CTGTCGCGGA TCTGGGCCGG CAACAGCCTC
GACGCGCCGA TCGCCGCGAT GGCCGAGGTC GAGGTCAACC GCCAGGCGAT GATGATCGCC
TATATCAACG ATTTCTGGGT GATGATGTGG CTGGTGGCCG CGATGCTGCC CCTGGTGCTG
CTGTTGCGGC CCGGGAAGGC GCCGAAGGGC AGCGGCGAGA GCCTCGCCGC GCTGGCCGAT
TAG
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| Protein sequence | MIVTTAIMAA TILVVLDQTI ATVALPHMQA ALGATPDTVT WVLTSYIMAT AVGTPLTAWL
TGRFGRRQVF LVCVLGFTIS SMLCGAATSL PMMVACRLAQ GFFGAFLMPM SQAFLYDMNP
PSLQVRAITM WGIGAMVGPI VGPVLGGYLT DAFDWRWVFF VNVPVGIVAL AGVFFGLPEF
PSARRSFDHV GFIMIAVALC SLQLALDRGT QQDWLDSPEI IAEFGLSIAA FWMLIFHLRR
SRHPIISPGL FANPSFSGAM VLAFVLMPTI IASNALLPQL FVQLLGYPVA TAGEMMLPRG
IAMTIGIFLG GQFTRWMDGR LQVALGVCIV IASLYVQTGF NMEMDQHLII WAGVLQGFGT
GLSMTVLNFT AMSSAPLSHR TEAAALYSLS RNTGSSIMLA IFSGLLAHDV QVNHAELGAR
ISSGGGMSLH LSRIWAGNSL DAPIAAMAEV EVNRQAMMIA YINDFWVMMW LVAAMLPLVL
LLRPGKAPKG SGESLAALAD
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