Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3528 |
Symbol | |
ID | 5197301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3885239 |
End bp | 3885580 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640583083 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | YP_001264012 |
Protein GI | 148556430 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.408605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.17098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCG TCACCGTCGA GGATTGCGTC GACAAGATTT CCAACCGGTT CGACCTGGTG CTGATGGCTG CCCAGCGGGC GCGCCAGATC TCGGGCGGGG CCGAACTGAC GATCGATCGC GACCGCGACA AGAATCCGGT CGTCGCCCTG CGCGAGATCG CCGAGCAGAC CGTCACGCCG GAGGAGCTGC ACGAGGCGGT CGTCTCGACG CTGCAGCGCG TCCGCGTCGA CGACGACGAT GCGCCGGACG AGATCGGCTC GCTGGCCGCG TCGGCCGAGG CGCTGCGCCT CACCGCCGCC GCTCCGCCGC GCAACCAGAA TATCGGCGGC GACTACGAAT AA
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Protein sequence | MARVTVEDCV DKISNRFDLV LMAAQRARQI SGGAELTIDR DRDKNPVVAL REIAEQTVTP EELHEAVVST LQRVRVDDDD APDEIGSLAA SAEALRLTAA APPRNQNIGG DYE
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