| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3525 |
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| Symbol | |
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| ID | 5197298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3880335 |
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| End bp | 3881060 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583080 |
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| Product | hypothetical protein |
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| Protein accession | YP_001264009 |
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| Protein GI | 148556427 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4340] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.164582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCCC AGACCGACGC GCCGCCCGCC TTCGACCCGA CCTCGCTTCG CCGCGACGGC
TTCGCGATCG TCGAGGCGGC GGAGATGTGC GCGCTGCTGC CGGCGGCGGC GGCCGAGGAT
TTCGCGGGCT TCGCGGGAAG CTGGGAACGG CTCGGCGACG ATCGCTTCAT GGCCGACGGG
GGGCGCTACC GGCGGCGGCG GCACGCGGTC TTCGCGGTCG GGCGGGACGT CGTGCGCAAG
CCGCACCAGC CGCATTACCA GAGCCGCGAC TACAATATCC TCAACGGCGG GATCGAACGC
TGGTTCGAGC CGGTCGAGCC GGACATCGCC GCCGGCCCGA CCCTGCGGGG CGTGATCGGC
TTCGCGGATG GCGTCTTCAC GGCGTCGTCG TCCCGCCCCG AAACGGGATG GCATGTCGAG
GTCCACCAGT TCCGGATCGA GGCCGCCGCC GACATGGCCG GGCTGCCGAC GCCGGAGGGG
CTCCACCGCG ACGGCGTCGA CTGGGTGCTG GTGATGCTGG TCGCGCGCCA CAATGTCGAG
GAGGGCGTGA CCAAGATCCA CGGGCCCGAC CGGCGCGAGA TCGGCTCCTT CTGCCTCGTC
GAGCCGTTCG ACGCGGTGCT GATCGACGAT CACCGCATCT ATCATGCGGT CACCCCGATC
GTGCCGATCG ATCCCGAGCG GCCCGCCTAT CGCGACGTGC TCGTCGTCAC TTTCCGGGCG
GCGTAG
|
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| Protein sequence | MLSQTDAPPA FDPTSLRRDG FAIVEAAEMC ALLPAAAAED FAGFAGSWER LGDDRFMADG
GRYRRRRHAV FAVGRDVVRK PHQPHYQSRD YNILNGGIER WFEPVEPDIA AGPTLRGVIG
FADGVFTASS SRPETGWHVE VHQFRIEAAA DMAGLPTPEG LHRDGVDWVL VMLVARHNVE
EGVTKIHGPD RREIGSFCLV EPFDAVLIDD HRIYHAVTPI VPIDPERPAY RDVLVVTFRA
A
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