| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3511 |
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| Symbol | |
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| ID | 5196250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3866626 |
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| End bp | 3867534 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583066 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001263995 |
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| Protein GI | 148556413 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.798024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0839848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGACGG GGATCGCCTT CCTGCTGCTC GCGGCCGTGC TGCTGCTGAC CGCCGGCTAT
GAGGTGATGC TCGCCCGCTC GCAGGCCTTC GCCCATCTCG ACCGGCGGCT GGCCGCCCAT
CTGCGCGGCG TCGCTCCCGG CGCGCTGCCG ACGGCGCAGC ACACCATCCC GGTGCCCGAC
ATCCTCGCGC CGCTGCTGGC CCGCGCCCAG ATCCTGCTGA CCAGCCGGCT GCTGCTCTCG
GTCAGCGGCG CGCTCGCGCT GGCCGTGATC GGCGCGCTGC TGGCGTTCGG GACCTTCGCC
GCGCTGGTCG TCGCGATCGC GCTGCCCGCC GCGCTGCTCT TCTACCTGCG CCGCCGCGCG
CGCCGCCGCA CCGAACAGCT CATCGAGGAC CTGCCCTTCT TCATCGACGC GGTCCGGCAG
CTGATCGCGG TCGGCAATTC GCTGCCCCAG GCGCTCGCCC GCGCGCTGCC CGCTTCCTCG
CCCGCGGTCC ATGCCTATCT CGGCCCGGCG ATCCGGCGGA TCGAGCTCGG CGCCCCGCTC
GGGGAGGCGC TGCAACAGGT CGCCACCCGG CTCCACCTCA CCGAGATCTC GATGCTGGCG
TCGGCGATCC GGGTCAACAT CCGCTATGGC GGCCCGCTCA CCCACATCCT CTCGAACATC
GCCGCGCTGA TCCGCGAGCG CGGCCGGGTC GCGCGCGAGA TCGCCGCCGC CACCGCCGAG
ATGCGGGTGA GCGCGAAGCT GCTCGCGGTG ATGCCGCTGA TCCTGGCGGC CTTCTTCCTG
CTGTCGAACC ACGCCTATCT CGACTTCTTC CTCGATCCGC AGCGCGGCCG CACCCTCGCC
CTGGTCGCGG TGGCGCTCCA GCTCATCGGC GCGGCCGCGA TGGCGCGCAT CCAGCGGCTG
GACTTCTGA
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| Protein sequence | MVTGIAFLLL AAVLLLTAGY EVMLARSQAF AHLDRRLAAH LRGVAPGALP TAQHTIPVPD
ILAPLLARAQ ILLTSRLLLS VSGALALAVI GALLAFGTFA ALVVAIALPA ALLFYLRRRA
RRRTEQLIED LPFFIDAVRQ LIAVGNSLPQ ALARALPASS PAVHAYLGPA IRRIELGAPL
GEALQQVATR LHLTEISMLA SAIRVNIRYG GPLTHILSNI AALIRERGRV AREIAAATAE
MRVSAKLLAV MPLILAAFFL LSNHAYLDFF LDPQRGRTLA LVAVALQLIG AAAMARIQRL
DF
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