Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3492 |
Symbol | |
ID | 5199359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3841197 |
End bp | 3842369 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640583041 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001263976 |
Protein GI | 148556394 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.695394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCGC AAACGCAAAA CGTCCCCGTC GCGATCGACG CCCGCATGCT GGGCCGGCCA GGCACCGGCG TCGCGACCTA TGCCGCCGCG CTGGAGACCG CGCTGGTCCT GTCGACGCGC GCGCCACTGC GCATCGCCGA TCCGAGCTGC GGGCGGCCGA TGGACCGCTC GCCCGCGCCG GCGCGCTGGC TGCGCTGGGC CGACGCGCTG GTCGATCGGC CGCGCCGGCT GGCGAAGCGC GACGGAGGGC TGGCCGGCCG CGACGTCTTC CGGCTCGCCC AGGTCCATTT CGACCGGCAC GGCACGCTGC TGCGGCTGCG CGCGCCGGGC GCGCCGGGGC TGGTCCACTG GACCTATCCG CTGCCGGTCC GGATCGAAGG CTGGACCAAT ATCTACACGG TCCATGACGC GATCCCGATC GTCCACCCGA CGCTCAGCCA GATCGACGGC GTCCGCCACC GCCGGCTGCT CGACGCGATC GCCCGCGACG CCGACCATAT GCTGACGGTG TCCGAGGCGG CGCGGCGCGA CATCATCGCT GCGCTCGGCT GCGCGCCCGG GGCGATCAGC GCCTGCCCGC CCGGGCTCGA CATCGCGGCG ACGCCGCACC CGCTTCCCGA CGGCCTCGCC CCCGGCGGCT TCCTGCTCGC GGTCGGCAGC GTCGAGCCGC GCAAGAACCT GCTCCGCCTC GCCGAGGCGC ATGCCCGCAG CGGGCTCGCG CTGCCGCTGG TGATCGCCGG CCCGGACGGC TGGCGGTCCG ACACGATCGC GCCCCGGCTC GCCGCCTGCC CCGGCATCGT CCGCCTGCCC TATGTCGACC GGCCGACGCT GGTCGCGCTG ATCGCGGCGG CGCGGGCGCT GGTCTTCCCG ACGATCACCG AGGGCTTCGG CCTGCCGATC GTCGAGGCGA TGCAGCTCGG CACACCGGTG CTGACCTCGC GCGGCGGCGC GACCGAGGAG GTCGCCGGCG GCGCCGCGCT GCTCGCCGAC CCGCTGTCGG TCGACGAGAT CGCCGCCGGG ATCGCGCGGC TCGGCGACGA GGAGGAGCTC GCCCGGCTGC GCGCGGCCGG CCTGGCGCGC GGCCGCGCCT TCACCGCCGC CGCCTTTGCC GAACGGATCG ACGCAGTGCA TCGCCGGCTG CTCGAACGCC ATGGCCAAAC GCCCGGCAAC TGA
|
Protein sequence | MPAQTQNVPV AIDARMLGRP GTGVATYAAA LETALVLSTR APLRIADPSC GRPMDRSPAP ARWLRWADAL VDRPRRLAKR DGGLAGRDVF RLAQVHFDRH GTLLRLRAPG APGLVHWTYP LPVRIEGWTN IYTVHDAIPI VHPTLSQIDG VRHRRLLDAI ARDADHMLTV SEAARRDIIA ALGCAPGAIS ACPPGLDIAA TPHPLPDGLA PGGFLLAVGS VEPRKNLLRL AEAHARSGLA LPLVIAGPDG WRSDTIAPRL AACPGIVRLP YVDRPTLVAL IAAARALVFP TITEGFGLPI VEAMQLGTPV LTSRGGATEE VAGGAALLAD PLSVDEIAAG IARLGDEEEL ARLRAAGLAR GRAFTAAAFA ERIDAVHRRL LERHGQTPGN
|
| |