Gene Swit_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3485 
Symbol 
ID5198066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3833300 
End bp3833641 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content62% 
IMG OID640583034 
Producthypothetical protein 
Protein accessionYP_001263969 
Protein GI148556387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.422765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC TCCAAACAAC CAACCATGGC TTGCAGCGGA TGTCGCAGCG CGGCCTTACC 
GTCTCCGACA TCGACCTCAT CATGGCTGTG GGCTGCGAAG TTCCCGACGG CGTGCTCGTC
CGGCGTAAGG ATTGCGATGA GATCGAGCGA AGGCTTAAGG AGATCATCGC CCGCGTGAAG
CGGCTCGAAG GCAAAAGGCT CGTTGTCTGC GATGGCCGCC TCGTCACCGC CTATTGTCAA
TCGGCGTGCA AACGGGACCC CCTATCGGCG CGCAAAAGGG ACCCCCTTTC ACGATGGCGC
AAGGTTGATC GGACACGCGC CTTTGCGCTG CGCGCGGCGT AG
 
Protein sequence
MTNLQTTNHG LQRMSQRGLT VSDIDLIMAV GCEVPDGVLV RRKDCDEIER RLKEIIARVK 
RLEGKRLVVC DGRLVTAYCQ SACKRDPLSA RKRDPLSRWR KVDRTRAFAL RAA