| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3479 |
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| Symbol | |
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| ID | 5197757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3823596 |
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| End bp | 3825533 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583028 |
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| Product | acetyl-coenzyme A synthetase |
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| Protein accession | YP_001263963 |
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| Protein GI | 148556381 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.837124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000568147 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGATC TTTATCCCGT TCCCGCCGAA TGGGCCGCCA GGGCGAAGGT GAAGGATGCC
GACTACAAGG CGCTCTACGC CCGATCGATC GACGACGCCC ACGCCTTCTG GCTGGAGCAG
GCGAAGCGGC TCGACTGGGT GCGCTTTCCG ACCAGGACCA ACGAGAGCAG CTTCGACGAG
GCCGATTTCG GGGTGAAGTG GTTCGCCGAC GGGCAGATCA ACGTCGCGGC CAACTGCCTC
GACCGCCATC TCGCCGAGCG CGGCGACCAG GTGGCGATCA TCTGGGAACC CGACGCGCCG
ACCGACGCGC CGCGGCGCTT CACCTACAGG CAGGTGCACG AGGAGGTCTG CCGCTTCGCC
AATGTGCTGA AGGCGCAGGG GGTGAAGAAG GGCGACCGCG TCACCGTCTA CCTGCCGATG
ATCCCCGAGG CGGCGTTCGC GCTGCTCGCC TGCGCGCGGA TCGGGGCGAT CCATTCGGTG
GTGTTCGGCG GCTTCTCGCC CGAGGCGCTG GCGGGCCGCA TCCAGGATTG CGACAGCTCG
ATCGTGATCA CCGCCGATTG CGGGCGGCGC GGCGGCAAGC TGGTGCCGCT CAAGACAAAC
GTCGACGCGG CCGCGCAGCA TGCGCCGAGC CTGACGTCGG TGATCGTGAT CCGCGCGACC
GGCGCCGAGG TGCCGATGCA GGCCGGGCGC GACGTCTGGT ACGACGAGGC GGCGCAGGGC
GTGTCGGCCG ACTGCCCGGC GGAGACGATG GACGCGGAGG ACCCGCTGTT CGTGCTCTAC
ACCAGCGGAT CGACGGGCAA GCCCAAGGGG GTGCTCCACA CGACGGGCGG CTATCTGCTC
TGGGCGAGCC TGACCCATGA GCTGTGCTTC GACTATCGGC CGGGACAGAT ATACTGGTGC
GCGGCGGACA TCGGCTGGGT CACCGGGCAC AGCTATATCG TCTATGGGCC GCTCGCCAAT
GGCGGCACGA CGCTGATGTA TGAGGGCGTG CCCAACTGGC CCGACGCGAG CCGCATCTGG
CAGGTGGTCG ACCGCCACCA GGTCGAGATC GTCTTCACCG CGCCGACCGC GCTGCGCGCG
CTGATGCGCG ACGGCGACGA GTTCGTGGCG CGGACCTCGC GCAAATCGCT CAAGCTGCTC
GGGACGGTCG GCGAGCCGAT CAACCCGGAG GCGTGGCGCT GGTATCACGA GGTGGTCGGC
GAGGGACGCT GCCCGATCGT CGACACCTGG TGGCAGACCG AGACGGGCGC GGCGATGATC
GCGCCGCTGC CGGGCGCGAC CGACCTCAAG CCCGGCAGCG CGACGCGGCC GCTGTTCGGG
GTGGTGCCCG AGCTGGTCGA CGCCGACGGC CAGGTGCTGG AGGGCGCGAC CGACGGCAAT
CTGTGCATCA CGCGCAGCTG GCCGGGGCAG ATGCGGACGG TCTGGGGCGA CCATGCGCGC
TTCTTCCAGA CCTATTTCTC GACCTACAAG GGCAAGTATT TCACCGGCGA CGGCTGCCGC
CGCGACGAGG ACGGCTATTA CTGGATCACC GGGCGCGTCG ACGACGTGAT CAACGTCTCG
GGCCACCGCA TGGGCACGGC CGAGGTCGAG AGCGCGCTGG TGCTCCACGC CAAGGTCGCC
GAGGCGGCGG TGGTCGGCTT CCCGCACGAC ATCAAGGGCC AGGGCATCTA CGCCTATGTG
ACGCTGAACG CGGGCGAGGA GGCGAGCGAG GCGCTACGCA AGGAACTGCG CGACTGGGTG
CGGACCGAAA TCGGGCCGAT CGCGACGCCC GACGCGATCC AGTTCGCGCC GGGGCTGCCC
AAGACCCGCT CGGGCAAGAT CATGCGCCGC ATCCTGCGCA AGATCGCCGA GGGCGACGTC
TCCTCGCTCG GCGACACCTC CACCCTCGCC GATCCGGCGG TGGTCGACGA TCTGGTTGCG
AACCGGATCA AAAGCTGA
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| Protein sequence | MTDLYPVPAE WAARAKVKDA DYKALYARSI DDAHAFWLEQ AKRLDWVRFP TRTNESSFDE
ADFGVKWFAD GQINVAANCL DRHLAERGDQ VAIIWEPDAP TDAPRRFTYR QVHEEVCRFA
NVLKAQGVKK GDRVTVYLPM IPEAAFALLA CARIGAIHSV VFGGFSPEAL AGRIQDCDSS
IVITADCGRR GGKLVPLKTN VDAAAQHAPS LTSVIVIRAT GAEVPMQAGR DVWYDEAAQG
VSADCPAETM DAEDPLFVLY TSGSTGKPKG VLHTTGGYLL WASLTHELCF DYRPGQIYWC
AADIGWVTGH SYIVYGPLAN GGTTLMYEGV PNWPDASRIW QVVDRHQVEI VFTAPTALRA
LMRDGDEFVA RTSRKSLKLL GTVGEPINPE AWRWYHEVVG EGRCPIVDTW WQTETGAAMI
APLPGATDLK PGSATRPLFG VVPELVDADG QVLEGATDGN LCITRSWPGQ MRTVWGDHAR
FFQTYFSTYK GKYFTGDGCR RDEDGYYWIT GRVDDVINVS GHRMGTAEVE SALVLHAKVA
EAAVVGFPHD IKGQGIYAYV TLNAGEEASE ALRKELRDWV RTEIGPIATP DAIQFAPGLP
KTRSGKIMRR ILRKIAEGDV SSLGDTSTLA DPAVVDDLVA NRIKS
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