Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3478 |
Symbol | |
ID | 5197756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3823000 |
End bp | 3823542 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640583027 |
Product | cytochrome B561 |
Protein accession | YP_001263962 |
Protein GI | 148556380 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.579466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000371098 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGAGG CCCTGCTCCA CTATAACCGC GTCGCCCGGA CGCTCCACTG GACGATCGGG GCGCTGGTCC TCACCAACCT GATCCTCGGC ATCTTCCACG ATCCGCTGGG CGAGCTGTTC CCGGCTATGC CGATCCACAA GTCGATCGGC TTCCTGGTGC TGGCGCTGAG CCTGTGCCGG CTGGCCTGGC GCCTCACCCA CCCCGCCCCG CCGCTGCCGG CGTCGGTGCC CGGCTGGGAA CAACGCGCGG CGCGCGGGCT GCACTGGACC TTCTACGCGC TGATGATCGC GATGCCGCTG ACCGGGTGGA TCTTCAGCTC GGCCGGCAAA TATCCGCTGA GCTTCTTCTT CCTGTTCGAC ATCCCCAAGT TCACGGTCGA GAAAGGATCG CCGATCGTCG CCGGGGCGCA CAGCGCGCAT GTCGTGCTCG GCTTCCTGTG GGCGGCGCTG CTGGTCGGCC ATGTCGGCGC GGCGCTGCGC CACCACTTCA TCCTCAGGAA CGGGGTGCTG ACGCGGATGT GGCGCTCGGC GCCGGGGGCT TAG
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Protein sequence | MTEALLHYNR VARTLHWTIG ALVLTNLILG IFHDPLGELF PAMPIHKSIG FLVLALSLCR LAWRLTHPAP PLPASVPGWE QRAARGLHWT FYALMIAMPL TGWIFSSAGK YPLSFFFLFD IPKFTVEKGS PIVAGAHSAH VVLGFLWAAL LVGHVGAALR HHFILRNGVL TRMWRSAPGA
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