Gene Swit_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3478 
Symbol 
ID5197756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3823000 
End bp3823542 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content68% 
IMG OID640583027 
Productcytochrome B561 
Protein accessionYP_001263962 
Protein GI148556380 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.579466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000371098 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGG CCCTGCTCCA CTATAACCGC GTCGCCCGGA CGCTCCACTG GACGATCGGG 
GCGCTGGTCC TCACCAACCT GATCCTCGGC ATCTTCCACG ATCCGCTGGG CGAGCTGTTC
CCGGCTATGC CGATCCACAA GTCGATCGGC TTCCTGGTGC TGGCGCTGAG CCTGTGCCGG
CTGGCCTGGC GCCTCACCCA CCCCGCCCCG CCGCTGCCGG CGTCGGTGCC CGGCTGGGAA
CAACGCGCGG CGCGCGGGCT GCACTGGACC TTCTACGCGC TGATGATCGC GATGCCGCTG
ACCGGGTGGA TCTTCAGCTC GGCCGGCAAA TATCCGCTGA GCTTCTTCTT CCTGTTCGAC
ATCCCCAAGT TCACGGTCGA GAAAGGATCG CCGATCGTCG CCGGGGCGCA CAGCGCGCAT
GTCGTGCTCG GCTTCCTGTG GGCGGCGCTG CTGGTCGGCC ATGTCGGCGC GGCGCTGCGC
CACCACTTCA TCCTCAGGAA CGGGGTGCTG ACGCGGATGT GGCGCTCGGC GCCGGGGGCT
TAG
 
Protein sequence
MTEALLHYNR VARTLHWTIG ALVLTNLILG IFHDPLGELF PAMPIHKSIG FLVLALSLCR 
LAWRLTHPAP PLPASVPGWE QRAARGLHWT FYALMIAMPL TGWIFSSAGK YPLSFFFLFD
IPKFTVEKGS PIVAGAHSAH VVLGFLWAAL LVGHVGAALR HHFILRNGVL TRMWRSAPGA