| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3476 |
|---|
| Symbol | rplL |
|---|
| ID | 5197754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3821736 |
|---|
| End bp | 3822116 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640583025 |
|---|
| Product | 50S ribosomal protein L7/L12 |
|---|
| Protein accession | YP_001263960 |
|---|
| Protein GI | 148556378 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0222] Ribosomal protein L7/L12 |
|---|
| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.145567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000717521 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACC TGCAGAAGCT TGTTGACGAT CTTTCGGCCC TCACCGTCCT CGAGGCCGCT
GAGCTTTCGA AGCTCCTCGA AGAGAAGTGG GGCGTTTCGG CCGCTGCGGC GGTCGCGGTT
GCGGCCCCGG CCGGCGGCGC CGGCGCCGGC GCCCCGGCAG CCGAAGTCAA GGACGAGTTC
GACGTCATCC TGACCGGCGA CGGCGGCAAG AAGATCAACG TGATCAAGGA AGTCCGCGCC
ATCACCGGCC TGGGCCTGAC CGAAGCCAAG ACCCTGGTCG AGTCGGCTCC GAAGGCCGTC
AAGGAAGGCG TCAACAAGGA CGAGGCCGAG AAGCTCAAGA AGCAGCTCGA GGAAGCCGGC
GCGACCGTCG AACTCAAGTA A
|
|---|
| Protein sequence | MADLQKLVDD LSALTVLEAA ELSKLLEEKW GVSAAAAVAV AAPAGGAGAG APAAEVKDEF
DVILTGDGGK KINVIKEVRA ITGLGLTEAK TLVESAPKAV KEGVNKDEAE KLKKQLEEAG
ATVELK
|
|---|
| |